RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SLAQ13239 276 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 ATP6V1FQ16864 119 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 MUC21Q5SSG8 566 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 Q5VSD8 79 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 ZNF479Q96JC4 524 aa12.2□□□□□ -0.46
UBXN1-216ENST00000533908 GPN1Q9HCN4 374 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-216ENST00000533908 K7EQD1 137 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
UBXN1-216ENST00000533908 ZNF138P52744 262 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 HBG1P69891 147 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 HBG2P69892 147 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 STX12Q86Y82 276 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 THAP6Q8TBB0 222 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 ARPC5LQ9BPX5 153 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 PTTG2Q9NZH5 202 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 LY96Q9Y6Y9 160 aa12.19□□□□□ -0.46
UBXN1-216ENST00000533908 OR10J4P0C629 311 aa12.18□□□□□ -0.46
UBXN1-216ENST00000533908 IQCF2Q8IXL9 164 aa12.18□□□□□ -0.46
UBXN1-216ENST00000533908 PHYHIPLQ96FC7 376 aa12.18□□□□□ -0.46
UBXN1-216ENST00000533908 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
UBXN1-216ENST00000533908 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
UBXN1-216ENST00000533908 TRGV4A0A0C4DH28 118 aa12.17□□□□□ -0.46
UBXN1-216ENST00000533908 H2AFB2P0C5Z0 115 aa12.17□□□□□ -0.46
UBXN1-216ENST00000533908 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
UBXN1-216ENST00000533908 ZNF266Q14584 549 aa12.17□□□□□ -0.46
UBXN1-216ENST00000533908 SRRM2Q9UQ35 2752 aaKnown RBP12.17□□□□□ -0.46
UBXN1-216ENST00000533908 IFNA5P01569 189 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 GYPEP15421 78 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 HAMPP81172 84 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 OR5C1Q8NGR4 320 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 RASL10AQ92737 203 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 PAXXQ9BUH6 204 aa12.16□□□□□ -0.46
UBXN1-216ENST00000533908 FLG2Q5D862 2391 aaPredicted RBP12.15□□□□□ -0.46
UBXN1-216ENST00000533908 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
UBXN1-216ENST00000533908 SRIP30626 198 aa12.15□□□□□ -0.46
UBXN1-216ENST00000533908 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
UBXN1-216ENST00000533908 FRZBQ92765 325 aa12.15□□□□□ -0.46
UBXN1-216ENST00000533908 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
UBXN1-216ENST00000533908 GCSHP23434 173 aa12.14□□□□□ -0.47
UBXN1-216ENST00000533908 TMEM183BQ1AE95 376 aa12.14□□□□□ -0.47
UBXN1-216ENST00000533908 TMEM183AQ8IXX5 376 aa12.14□□□□□ -0.47
UBXN1-216ENST00000533908 OR5AC2Q9NZP5 309 aa12.14□□□□□ -0.47
UBXN1-216ENST00000533908 H0YIZ8 118 aa12.13□□□□□ -0.47
UBXN1-216ENST00000533908 SIX6O95475 246 aa12.13□□□□□ -0.47
UBXN1-216ENST00000533908 EVI2AP22794 236 aa12.13□□□□□ -0.47
UBXN1-216ENST00000533908 Q6AWC8 147 aa12.13□□□□□ -0.47
UBXN1-216ENST00000533908 WDR61Q9GZS3 305 aaKnown RBP12.13□□□□□ -0.47
UBXN1-216ENST00000533908 MYCBP2O75592 4640 aa12.13□□□□□ -0.47
UBXN1-216ENST00000533908 VPS13BQ7Z7G8 4022 aa12.12□□□□□ -0.47
UBXN1-216ENST00000533908 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
UBXN1-216ENST00000533908 GNRH2O43555 120 aa12.12□□□□□ -0.47
UBXN1-216ENST00000533908 SPXQ9BT56 116 aa12.12□□□□□ -0.47
UBXN1-216ENST00000533908 LRCOL1A6NCL2 159 aa12.11□□□□□ -0.47
UBXN1-216ENST00000533908 DIRC3C9JPN6 131 aa12.11□□□□□ -0.47
UBXN1-216ENST00000533908 K7EP13 123 aa12.11□□□□□ -0.47
UBXN1-216ENST00000533908 EIF3GO75821 320 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBXN1-216ENST00000533908 ORM1P02763 201 aa12.11□□□□□ -0.47
UBXN1-216ENST00000533908 CRYGDP07320 174 aa12.11□□□□□ -0.47
UBXN1-216ENST00000533908 SLC25A31Q9H0C2 315 aa12.11□□□□□ -0.47
UBXN1-216ENST00000533908 OR7C2O60412 319 aa12.1□□□□□ -0.47
UBXN1-216ENST00000533908 CSN1S1P47710 185 aa12.1□□□□□ -0.47
UBXN1-216ENST00000533908 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
UBXN1-216ENST00000533908 FAM159AQ6UWV7 190 aa12.1□□□□□ -0.47
UBXN1-216ENST00000533908 PCNPQ8WW12 178 aaKnown RBP12.1□□□□□ -0.47
UBXN1-216ENST00000533908 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
UBXN1-216ENST00000533908 FAM240BA0A1B0GVZ2 78 aa12.09□□□□□ -0.47
UBXN1-216ENST00000533908 TRGV11A0A075B6L2 103 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 IGHV3-16A0A0C4DH30 117 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 LRRC37A5PQ49AS3 106 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 TVP23CQ96ET8 276 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 TXNDC17Q9BRA2 123 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 NAGKQ9UJ70 344 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.48
UBXN1-216ENST00000533908 C9JCJ5 164 aa12.07□□□□□ -0.48
UBXN1-216ENST00000533908 UBE2L3P68036 154 aaKnown RBP12.07□□□□□ -0.48
UBXN1-216ENST00000533908 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
UBXN1-216ENST00000533908 CCDC32Q9BV29 185 aa12.07□□□□□ -0.48
UBXN1-216ENST00000533908 FAM30AQ9NZY2 134 aa12.07□□□□□ -0.48
UBXN1-216ENST00000533908 IGLV5-52A0A0A0MRZ9 124 aa12.06□□□□□ -0.48
UBXN1-216ENST00000533908 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
UBXN1-216ENST00000533908 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
UBXN1-216ENST00000533908 M0R2P5 195 aa12.06□□□□□ -0.48
UBXN1-216ENST00000533908 NMES1Q9C002 83 aa12.06□□□□□ -0.48
UBXN1-216ENST00000533908 PGPA6NDG6 321 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 FAM229AH3BQW9 127 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 TYMSP04818 313 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 GATA1P15976 413 aaPredicted RBP12.05□□□□□ -0.48
UBXN1-216ENST00000533908 TIRAPP58753 221 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 TMED6Q8WW62 240 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
UBXN1-216ENST00000533908 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
UBXN1-216ENST00000533908 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
UBXN1-216ENST00000533908 NHLRC2Q8NBF2 726 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms