RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 NUDT11Q96G61 164 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 CTDSP1Q9GZU7 261 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 TRBV7-9A0A0J9YWB2 115 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 DUSP14O95147 198 aaKnown RBP11.8□□□□□ -0.52
TRIM3-213ENST00000533309 IGKV3-20P01619 116 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 ANAPC16Q96DE5 110 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 ODF3Q96PU9 254 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 V9GYV3 84 aa11.8□□□□□ -0.52
TRIM3-213ENST00000533309 RBMY1BA6NDE4 496 aaKnown RBP11.79□□□□□ -0.52
TRIM3-213ENST00000533309 RBMY1EA6NEQ0 496 aaKnown RBP11.79□□□□□ -0.52
TRIM3-213ENST00000533309 H7BYZ3 331 aa11.79□□□□□ -0.52
TRIM3-213ENST00000533309 RBMY1DP0C7P1 496 aaKnown RBP11.79□□□□□ -0.52
TRIM3-213ENST00000533309 KIR3DS1Q14943 382 aa11.79□□□□□ -0.52
TRIM3-213ENST00000533309 OR4B1Q8NGF8 309 aa11.79□□□□□ -0.52
TRIM3-213ENST00000533309 WFDC10AQ9H1F0 79 aa11.79□□□□□ -0.52
TRIM3-213ENST00000533309 KLLNB2CW77 178 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 PPP1R2P9O14990 202 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 SH2D1AO60880 128 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 FAM162BQ5T6X4 162 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 C15orf54Q8N8G6 183 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 CMC4P56277 68 aaPredicted RBP11.78□□□□□ -0.52
TRIM3-213ENST00000533309 BTN1A1Q13410 526 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 Q6ZQT7 251 aa11.78□□□□□ -0.52
TRIM3-213ENST00000533309 J3KRW8 73 aa11.77□□□□□ -0.53
TRIM3-213ENST00000533309 PRR31Q5SQ13 230 aa11.77□□□□□ -0.53
TRIM3-213ENST00000533309 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.53
TRIM3-213ENST00000533309 NOTCH1P46531 2555 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
TRIM3-213ENST00000533309 M0R2Z0 102 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
TRIM3-213ENST00000533309 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
TRIM3-213ENST00000533309 P01737 135 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
TRIM3-213ENST00000533309 OXLD1Q5BKU9 147 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 CLUHP3Q96NS8 147 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
TRIM3-213ENST00000533309 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
TRIM3-213ENST00000533309 CXorf65A6NEN9 183 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 GPX1P07203 203 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 LEPP41159 167 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 TRPT1Q86TN4 253 aaKnown RBP11.75□□□□□ -0.53
TRIM3-213ENST00000533309 DAZAP1Q96EP5 407 aaKnown RBP11.75□□□□□ -0.53
TRIM3-213ENST00000533309 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 C11orf21Q9P2W6 132 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 MGAM2Q2M2H8 2515 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 RNASE4P34096 147 aaKnown RBP11.75□□□□□ -0.53
TRIM3-213ENST00000533309 RPL19P84098 196 aaKnown RBP11.75□□□□□ -0.53
TRIM3-213ENST00000533309 GFI1BQ5VTD9 330 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 Q6AWC8 147 aa11.75□□□□□ -0.53
TRIM3-213ENST00000533309 TRAV12-2A0A075B6T6 113 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 CDKN1BP46527 198 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 CT83Q5H943 113 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 STHQ8IWL8 128 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 OR2D3Q8NGH3 330 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 IL36BQ9NZH7 164 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 URGCP-MRPS24S4R325 110 aa11.74□□□□□ -0.53
TRIM3-213ENST00000533309 CRXO43186 299 aaPredicted RBP11.73□□□□□ -0.53
TRIM3-213ENST00000533309 TSPOP30536 169 aa11.73□□□□□ -0.53
TRIM3-213ENST00000533309 FXYD7P58549 80 aa11.73□□□□□ -0.53
TRIM3-213ENST00000533309 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
TRIM3-213ENST00000533309 C7orf71A4D174 169 aa11.72□□□□□ -0.53
TRIM3-213ENST00000533309 ELOBQ15370 118 aa11.72□□□□□ -0.53
TRIM3-213ENST00000533309 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
TRIM3-213ENST00000533309 Q8N1Y9 231 aa11.72□□□□□ -0.53
TRIM3-213ENST00000533309 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
TRIM3-213ENST00000533309 IMMP2LQ96T52 175 aa11.72□□□□□ -0.53
TRIM3-213ENST00000533309 TRAV21A0A0B4J279 112 aa11.71□□□□□ -0.53
TRIM3-213ENST00000533309 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.53
TRIM3-213ENST00000533309 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
TRIM3-213ENST00000533309 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
TRIM3-213ENST00000533309 FAM3BP58499 235 aaPredicted RBP11.71□□□□□ -0.53
TRIM3-213ENST00000533309 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.53
TRIM3-213ENST00000533309 GTSF1Q8WW33 167 aa11.71□□□□□ -0.53
TRIM3-213ENST00000533309 TMSB15BA0A087X1C1 80 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 TRAV12-3A0A0B4J271 114 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 TMEM189A5PLL7 270 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.54
TRIM3-213ENST00000533309 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 GZMBP10144 247 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 TCL1AP56279 114 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 KRTAP10-11P60412 298 aa11.71□□□□□ -0.54
TRIM3-213ENST00000533309 RBMY1FQ15415 496 aaKnown RBP11.71□□□□□ -0.54
TRIM3-213ENST00000533309 A8MWL6 223 aa11.7□□□□□ -0.54
TRIM3-213ENST00000533309 ORM1P02763 201 aa11.7□□□□□ -0.54
TRIM3-213ENST00000533309 NEU1Q99519 415 aa11.7□□□□□ -0.54
TRIM3-213ENST00000533309 TGIF2-C20orf24A0A0A6YYL0 155 aa11.69□□□□□ -0.54
TRIM3-213ENST00000533309 COLCA2A8K830 154 aa11.69□□□□□ -0.54
TRIM3-213ENST00000533309 CXCL1P09341 107 aa11.69□□□□□ -0.54
TRIM3-213ENST00000533309 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
TRIM3-213ENST00000533309 S100PP25815 95 aa11.69□□□□□ -0.54
TRIM3-213ENST00000533309 A0A1W2PPQ1 181 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms