RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 A0A0G2JLM5 398 aa13.86□□□□□ -0.19
UBXN1-213ENST00000532904 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
UBXN1-213ENST00000532904 SMIM15Q7Z3B0 74 aa13.86□□□□□ -0.19
UBXN1-213ENST00000532904 WFDC3Q8IUB2 231 aa13.86□□□□□ -0.19
UBXN1-213ENST00000532904 TMEM11P17152 192 aa13.86□□□□□ -0.19
UBXN1-213ENST00000532904 MED13LQ71F56 2210 aa13.85□□□□□ -0.19
UBXN1-213ENST00000532904 SPTAN1Q13813 2472 aaKnown RBP13.85□□□□□ -0.19
UBXN1-213ENST00000532904 GAS8-AS1O95177 125 aa13.85□□□□□ -0.19
UBXN1-213ENST00000532904 TNFRSF6BO95407 300 aa13.85□□□□□ -0.19
UBXN1-213ENST00000532904 LEPP41159 167 aa13.85□□□□□ -0.19
UBXN1-213ENST00000532904 ODF1Q14990 250 aa13.85□□□□□ -0.19
UBXN1-213ENST00000532904 CLEC2AQ6UVW9 174 aa13.85□□□□□ -0.19
UBXN1-213ENST00000532904 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 RBAKDNA6NC62 111 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 SAA4P35542 130 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 ERCC8Q13216 396 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 BBC3Q96PG8 261 aaPredicted RBP13.84□□□□□ -0.19
UBXN1-213ENST00000532904 NPFFO15130 113 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 OR2K2Q8NGT1 345 aa13.84□□□□□ -0.19
UBXN1-213ENST00000532904 TACC2O95359 2948 aa13.83□□□□□ -0.19
UBXN1-213ENST00000532904 PRAC2D3DTV9 90 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 ATP5J2P56134 94 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 ZNF843Q8N446 348 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 HIGD1BQ9P298 99 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 HHLA3Q9XRX5 114 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 USP9XQ93008 2570 aaPredicted RBP13.83□□□□□ -0.2
UBXN1-213ENST00000532904 IGHV4-61A0A0C4DH41 118 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 PRB1P04280 392 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 RAB9AP51151 201 aa13.83□□□□□ -0.2
UBXN1-213ENST00000532904 IGHV3OR16-8A0A075B7F1 116 aa13.82□□□□□ -0.2
UBXN1-213ENST00000532904 CENPVL3A0A0U1RRI6 287 aa13.82□□□□□ -0.2
UBXN1-213ENST00000532904 Q8N9W7 124 aa13.82□□□□□ -0.2
UBXN1-213ENST00000532904 ZNF502Q8TBZ5 544 aa13.82□□□□□ -0.2
UBXN1-213ENST00000532904 NAA38Q9BRA0 125 aaKnown RBP13.82□□□□□ -0.2
UBXN1-213ENST00000532904 ZFAND3Q9H8U3 227 aa13.82□□□□□ -0.2
UBXN1-213ENST00000532904 A0A1W2PPM0 123 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 BUB3O43684 328 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 EVI2AP22794 236 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 DSCR9P59020 149 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 FAM110DQ8TAY7 271 aaPredicted RBP13.81□□□□□ -0.2
UBXN1-213ENST00000532904 RAB37Q96AX2 223 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 ABCA2Q9BZC7 2435 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 IGKV2D-26A0A0A0MRZ7 120 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 IGHV3-35A0A0C4DH35 117 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 SAP30O75446 220 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 KLK9Q2XQG4 91 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 IL17RELQ6ZVW7 336 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 Q8N8P6 123 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 SLC50A1Q9BRV3 221 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 MEGF9Q9H1U4 602 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 SMPXQ9UHP9 88 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 KLK9Q9UKQ9 250 aa13.81□□□□□ -0.2
UBXN1-213ENST00000532904 IGLV2-18A0A075B6J9 118 aa13.8□□□□□ -0.2
UBXN1-213ENST00000532904 IGKCP01834 107 aa13.8□□□□□ -0.2
UBXN1-213ENST00000532904 PRSS1P07477 247 aa13.8□□□□□ -0.2
UBXN1-213ENST00000532904 OR5A1Q8NGJ0 315 aa13.8□□□□□ -0.2
UBXN1-213ENST00000532904 IGKV3D-20A0A0C4DH25 116 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 ATP5LO75964 103 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 GATA1P15976 413 aaPredicted RBP13.79□□□□□ -0.2
UBXN1-213ENST00000532904 PPIFP30405 207 aaKnown RBP13.79□□□□□ -0.2
UBXN1-213ENST00000532904 RNF182Q8N6D2 247 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 TMEM158Q8WZ71 300 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 FLNCQ14315 2725 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 C15orf32Q32M92 178 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
UBXN1-213ENST00000532904 PRSS47A8MTI9 375 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 SMIM13P0DJ93 91 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 C11orf21Q9P2W6 132 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 SPCS1Q9Y6A9 102 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 IGHV4-30-2A0A087WSY4 118 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 IGHV1-69DA0A0B4J2H0 117 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 DPM2O94777 84 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 NEGR1Q7Z3B1 354 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 FOXC2Q99958 501 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 AGPAT4-IT1Q9H0P7 198 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
UBXN1-213ENST00000532904 CLPSL1A2RUU4 121 aa13.77□□□□□ -0.21
UBXN1-213ENST00000532904 G3V4G9 280 aa13.77□□□□□ -0.21
UBXN1-213ENST00000532904 CLEC3BP05452 202 aa13.77□□□□□ -0.21
UBXN1-213ENST00000532904 CHAC1Q9BUX1 264 aa13.77□□□□□ -0.21
UBXN1-213ENST00000532904 COX6B1P14854 86 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 MYO18BQ8IUG5 2567 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 TRGV3P03979 118 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 FABP2P12104 132 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 GCSHP23434 173 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 FXYD2P54710 66 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
UBXN1-213ENST00000532904 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
UBXN1-213ENST00000532904 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 SMIM17P0DL12 118 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 SRSF1Q07955 248 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBXN1-213ENST00000532904 ECSCRQ19T08 205 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 SAMD5Q5TGI4 173 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 NRACQ8N912 160 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms