RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
NXF1-213ENST00000532297 IGFL4Q6B9Z1 124 aa11.58□□□□□ -0.56
NXF1-213ENST00000532297 ZNF491Q8N8L2 437 aa11.58□□□□□ -0.56
NXF1-213ENST00000532297 RNF125Q96EQ8 232 aa11.58□□□□□ -0.56
NXF1-213ENST00000532297 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
NXF1-213ENST00000532297 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
NXF1-213ENST00000532297 TMEM158Q8WZ71 300 aa11.58□□□□□ -0.56
NXF1-213ENST00000532297 TNFRSF6BO95407 300 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 WFDC12Q8WWY7 111 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 MAP1AP78559 2803 aaPredicted RBP11.57□□□□□ -0.56
NXF1-213ENST00000532297 TRAV26-1A0A087WT03 109 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 FOXC1Q12948 553 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 TCTEX1D4Q5JR98 221 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 HIST1H4GQ99525 98 aa11.57□□□□□ -0.56
NXF1-213ENST00000532297 NXT2Q9NPJ8 142 aaKnown RBP11.57□□□□□ -0.56
NXF1-213ENST00000532297 B9A039 149 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 K7EIM0 57 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 ATP5LO75964 103 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 Q8TAT8 98 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 PRR25Q96S07 402 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 AGRNO00468 2067 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 ZNF80P51504 273 aaPredicted RBP11.56□□□□□ -0.56
NXF1-213ENST00000532297 TTC9CQ8N5M4 171 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 A0A1B0GWB2 263 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 CD3EP07766 207 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 GATA1P15976 413 aaPredicted RBP11.56□□□□□ -0.56
NXF1-213ENST00000532297 HES1Q14469 280 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 MRAP2Q96G30 205 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
NXF1-213ENST00000532297 PRO0461Q9UI25 63 aa11.56□□□□□ -0.56
NXF1-213ENST00000532297 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 TAL2Q16559 108 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 ORM1P02763 201 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 CRYBA4P53673 196 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 PDE6HQ13956 83 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 ZNF672Q499Z4 452 aaPredicted RBP11.55□□□□□ -0.56
NXF1-213ENST00000532297 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
NXF1-213ENST00000532297 APOMO95445 188 aa11.54□□□□□ -0.56
NXF1-213ENST00000532297 PPIFP30405 207 aaKnown RBP11.54□□□□□ -0.56
NXF1-213ENST00000532297 NDPQ00604 133 aa11.54□□□□□ -0.56
NXF1-213ENST00000532297 GEMIN7Q9H840 131 aaKnown RBP11.54□□□□□ -0.56
NXF1-213ENST00000532297 RNF5Q99942 180 aa11.54□□□□□ -0.56
NXF1-213ENST00000532297 CHD8Q9HCK8 2581 aa11.53□□□□□ -0.56
NXF1-213ENST00000532297 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
NXF1-213ENST00000532297 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
NXF1-213ENST00000532297 LCNL1Q6ZST4 164 aa11.53□□□□□ -0.56
NXF1-213ENST00000532297 DYNAPQ8N1N2 210 aa11.53□□□□□ -0.56
NXF1-213ENST00000532297 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
NXF1-213ENST00000532297 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.56
NXF1-213ENST00000532297 NCBP2LA6PVI3 153 aaKnown RBP11.52□□□□□ -0.57
NXF1-213ENST00000532297 LY6LH3BQJ8 138 aa11.52□□□□□ -0.57
NXF1-213ENST00000532297 NDUFA3O95167 84 aa11.52□□□□□ -0.57
NXF1-213ENST00000532297 COX8CQ7Z4L0 72 aa11.52□□□□□ -0.57
NXF1-213ENST00000532297 MYOZ3Q8TDC0 251 aa11.52□□□□□ -0.57
NXF1-213ENST00000532297 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
NXF1-213ENST00000532297 Q8N8P6 123 aa11.51□□□□□ -0.57
NXF1-213ENST00000532297 NBR2O15453 112 aa11.51□□□□□ -0.57
NXF1-213ENST00000532297 SYT8Q8NBV8 401 aa11.51□□□□□ -0.57
NXF1-213ENST00000532297 FOXI1Q12951 378 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 NCOR2Q9Y618 2525 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 DTX2Q86UW9 622 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 C8orf86Q6ZUL3 223 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 CNFNQ9BYD5 112 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
NXF1-213ENST00000532297 IGLV2-18A0A075B6J9 118 aa11.49□□□□□ -0.57
NXF1-213ENST00000532297 A0A087WX48 190 aa11.49□□□□□ -0.57
NXF1-213ENST00000532297 CCL21O00585 134 aa11.49□□□□□ -0.57
NXF1-213ENST00000532297 SPINK8P0C7L1 97 aa11.49□□□□□ -0.57
NXF1-213ENST00000532297 CFHR4Q92496 578 aa11.49□□□□□ -0.57
NXF1-213ENST00000532297 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
NXF1-213ENST00000532297 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 FABP5P3A8MUU1 101 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
NXF1-213ENST00000532297 HOXA3O43365 443 aaPredicted RBP11.48□□□□□ -0.57
NXF1-213ENST00000532297 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 CYSLTR1Q9Y271 337 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 PLNP26678 52 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 LAGE3Q14657 143 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 MORN3Q6PF18 240 aaPredicted RBP11.48□□□□□ -0.57
NXF1-213ENST00000532297 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
NXF1-213ENST00000532297 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 RAB1BQ9H0U4 201 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 PGPEP1Q9NXJ5 209 aa11.48□□□□□ -0.57
NXF1-213ENST00000532297 EFNA4P52798 201 aa11.47□□□□□ -0.57
NXF1-213ENST00000532297 VKORC1Q9BQB6 163 aa11.47□□□□□ -0.57
NXF1-213ENST00000532297 TRAV26-2A0A0B4J265 109 aa11.46□□□□□ -0.57
NXF1-213ENST00000532297 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
NXF1-213ENST00000532297 MT-ATP8P03928 68 aa11.46□□□□□ -0.57
NXF1-213ENST00000532297 TRGV3P03979 118 aa11.46□□□□□ -0.57
NXF1-213ENST00000532297 RPL7P18124 248 aaKnown RBP11.46□□□□□ -0.57
NXF1-213ENST00000532297 MFAP4P55083 255 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms