RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
LRRK1-209ENST00000532145 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
LRRK1-209ENST00000532145 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
LRRK1-209ENST00000532145 GATA1P15976 413 aaPredicted RBP10.86□□□□□ -0.67
LRRK1-209ENST00000532145 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
LRRK1-209ENST00000532145 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 G3V318 75 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 H3BUT2 72 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 SAA4P35542 130 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 EEF1AKMT3Q96AZ1 226 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 HIGD1BQ9P298 99 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 SMPXQ9UHP9 88 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 U3KQE9 123 aa10.85□□□□□ -0.67
LRRK1-209ENST00000532145 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 PRSS1P07477 247 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 KLRB1Q12918 225 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 C8orf86Q6ZUL3 223 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 TMEM158Q8WZ71 300 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 METTL26Q96S19 204 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 A0A1W2PPR1 153 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 K7EP34 96 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 ATP5LO75964 103 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 IGKCP01834 107 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 TRGV3P03979 118 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
LRRK1-209ENST00000532145 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
LRRK1-209ENST00000532145 K7ERU9 68 aa10.83□□□□□ -0.68
LRRK1-209ENST00000532145 NRACQ8N912 160 aa10.83□□□□□ -0.68
LRRK1-209ENST00000532145 ASH1LQ9NR48 2969 aaKnown RBP10.83□□□□□ -0.68
LRRK1-209ENST00000532145 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
LRRK1-209ENST00000532145 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
LRRK1-209ENST00000532145 CENPVL3A0A0U1RRI6 287 aa10.83□□□□□ -0.68
LRRK1-209ENST00000532145 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 MED13LQ71F56 2210 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 SMIM17P0DL12 118 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 DPM2O94777 84 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 ATP6V0BQ99437 205 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 FOXC2Q99958 501 aa10.82□□□□□ -0.68
LRRK1-209ENST00000532145 CACNA1BQ00975 2339 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 A0A1W2PPM0 123 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 IGHV3-49A0A0A0MS15 119 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 LAGE3Q14657 143 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 C5orf56Q8N8D9 126 aa10.81□□□□□ -0.68
LRRK1-209ENST00000532145 TMEM8BA6NDV4 472 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 RAB37Q96AX2 223 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 NAA38Q9BRA0 125 aaKnown RBP10.8□□□□□ -0.68
LRRK1-209ENST00000532145 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
LRRK1-209ENST00000532145 UCNP55089 124 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 LMO4P61968 165 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 ZC2HC1BQ5TFG8 222 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 TTTY13Q9BZ97 58 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 LENEPQ9Y5L5 61 aa10.8□□□□□ -0.68
LRRK1-209ENST00000532145 TRBV25-1A0A075B6N4 114 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 EFNA4P52798 201 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 Q6ZQT7 251 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 NPFFO15130 113 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 SPANXN1Q5VSR9 72 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 GTSCR1Q86UQ5 136 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 OR5A1Q8NGJ0 315 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 UFC1Q9Y3C8 167 aa10.79□□□□□ -0.68
LRRK1-209ENST00000532145 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 FXYD2P54710 66 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 C19orf54Q5BKX5 351 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 ITLN2Q8WWU7 325 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-209ENST00000532145 MRPL35Q9NZE8 188 aaKnown RBP10.78□□□□□ -0.68
LRRK1-209ENST00000532145 TRAV40A0A0B4J280 105 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 GCSHP23434 173 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 SRSF1Q07955 248 aaKnown RBP eCLIP10.78□□□□□ -0.68
LRRK1-209ENST00000532145 C9orf139Q6ZV77 190 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 MRAP2Q96G30 205 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 C16orf92Q96LL3 132 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 TM2D2Q9BX73 214 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 SPCS1Q9Y6A9 102 aa10.78□□□□□ -0.68
LRRK1-209ENST00000532145 COTL1Q14019 142 aa10.77□□□□□ -0.68
LRRK1-209ENST00000532145 TM4SF20Q53R12 229 aa10.77□□□□□ -0.68
LRRK1-209ENST00000532145 BPESC1Q9GZL8 116 aa10.77□□□□□ -0.68
LRRK1-209ENST00000532145 A0A087WX48 190 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 FAM223BA6NKX1 122 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 SAP30O75446 220 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 PRR9Q5T870 116 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 FAM223AQ8IWN6 122 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 TMEM160Q9NX00 188 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 RAXQ9Y2V3 346 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 ATRXP46100 2492 aa10.77□□□□□ -0.69
LRRK1-209ENST00000532145 FABP2P12104 132 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms