RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 KIR3DP1A8MWS1 328 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 J3QR89 54 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 FXYD1O00168 92 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 LYZL6O75951 148 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 PRM2P04554 102 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 ZNF728P0DKX0 622 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 PTHLHP12272 177 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 NTF3P20783 257 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 RPL35P42766 123 aaKnown RBP3.55□□□□□ -1.84
PCF11-202ENST00000528336 RAB5CP51148 216 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 TMBIM6P55061 237 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 COPZ1P61923 177 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 PPP3R1P63098 170 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 FUT5Q11128 374 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 TMEM244Q5VVB8 128 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 SSX8Q7RTT4 187 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 ARPINQ7Z6K5 226 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 PCP2Q8IVA1 136 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 ZFAND2AQ8N6M9 145 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 OR51A4Q8NGJ6 313 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 ITLN2Q8WWU7 325 aaPredicted RBP3.55□□□□□ -1.84
PCF11-202ENST00000528336 HIST1H2BAQ96A08 127 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 HDHD3Q9BSH5 251 aaPredicted RBP3.55□□□□□ -1.84
PCF11-202ENST00000528336 DERL1Q9BUN8 251 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 TTTY12Q9BZ98 90 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 PROK2Q9HC23 129 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 BCL2L10Q9HD36 194 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 CKLFQ9UBR5 152 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 BOKQ9UMX3 212 aaPredicted RBP3.55□□□□□ -1.84
PCF11-202ENST00000528336 ZFP30Q9Y2G7 519 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 CPAMD8Q8IZJ3 1885 aa3.55□□□□□ -1.84
PCF11-202ENST00000528336 BSNQ9UPA5 3926 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 NBASA2RRP1 2371 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 IGHV1-58A0A0C4DH39 117 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 A0A1B0GVG6 124 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 TMEM212A6NML5 194 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 C19orf84I3L1E1 186 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 I3L521 148 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 NPFFO15130 113 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 HLA-DQA1P01909 254 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 PRB1P04280 392 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 OR5AC1P0C628 307 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 IGHV3-30-3P0DP02 117 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 CDK6Q00534 326 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 PLGLB1Q02325 96 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 MSMO1Q15800 293 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 AADACL3Q5VUY0 350 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 PHF5AQ7RTV0 110 aaKnown RBP3.54□□□□□ -1.84
PCF11-202ENST00000528336 C10orf111Q8N326 155 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 ACBD7Q8N6N7 88 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 TCTEX1D1Q8N7M0 179 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 OR2T10Q8NGZ9 312 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 CIRBP-AS1Q8TBR5 109 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 PLA2G12AQ9BZM1 189 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 ZNF586Q9NXT0 402 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 MYO18BQ8IUG5 2567 aa3.54□□□□□ -1.84
PCF11-202ENST00000528336 NUP214P35658 2090 aaPredicted RBP3.53□□□□□ -1.84
PCF11-202ENST00000528336 TNRC6AQ8NDV7 1962 aaKnown RBP3.53□□□□□ -1.84
PCF11-202ENST00000528336 POLEQ07864 2286 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 GGT3PA6NGU5 568 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 GGTLC3B5MD39 225 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 NDUFB2O95178 105 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 IFNA17P01571 189 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 MT-ND4LP03901 98 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 FGF7P21781 194 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 CRYBB3P26998 211 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 DSCR4P56555 118 aaPredicted RBP3.53□□□□□ -1.84
PCF11-202ENST00000528336 RPL30P62888 115 aaKnown RBP3.53□□□□□ -1.84
PCF11-202ENST00000528336 ZNF117Q03924 483 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 TEX261Q6UWH6 196 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 GLIPR1L1Q6UWM5 242 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 AMN1Q8IY45 258 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 C3orf22Q8N5N4 141 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 DAND5Q8N907 189 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 OR10G2Q8NGC3 310 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 ZC2HC1AQ96GY0 325 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 PSMG3Q9BT73 122 aaPredicted RBP3.53□□□□□ -1.84
PCF11-202ENST00000528336 CBLN4Q9NTU7 201 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 ASF1BQ9NVP2 202 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 IL36BQ9NZH7 164 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 FUT9Q9Y231 359 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 ZNF443Q9Y2A4 671 aaPredicted RBP3.53□□□□□ -1.84
PCF11-202ENST00000528336 PHLDA3Q9Y5J5 127 aa3.53□□□□□ -1.84
PCF11-202ENST00000528336 HELZ2Q9BYK8 2649 aaKnown RBP3.52□□□□□ -1.85
PCF11-202ENST00000528336 IGKV2D-24A0A075B6R9 120 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 TRGV5A0A0B4J1U4 118 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 IGHV1-3A0A0C4DH29 117 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 LOC100130705A0A1B0GUX0 176 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 MEIS3P1A6NDR6 274 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 C17orf51A8MQB3 221 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 RBFOX2O43251 390 aaKnown RBP eCLIP3.52□□□□□ -1.85
PCF11-202ENST00000528336 OR2T1O43869 369 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 NPPCP23582 126 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 SDC2P34741 201 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 AKR1D1P51857 326 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 AKR1C2P52895 323 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 LINC00315P59091 139 aa3.52□□□□□ -1.85
PCF11-202ENST00000528336 PKIAP61925 76 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms