RNA–Protein interactions for RNA: ENST00000526469.5

GSDMD-207, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 1,643 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-207ENST00000526469 SH2D1AO60880 128 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 HLA-DRB4P13762 266 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 CRISP2P16562 243 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 CRIP1P50238 77 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 FAM110AQ9BQ89 295 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 URGCP-MRPS24S4R325 110 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 HLA-DRB4X5D2U9 266 aa17.21■□□□□ 0.35
GSDMD-207ENST00000526469 COL6A5A8TX70 2615 aa17.2■□□□□ 0.34
GSDMD-207ENST00000526469 FABP5P3A8MUU1 101 aa17.2■□□□□ 0.34
GSDMD-207ENST00000526469 LEPP41159 167 aa17.2■□□□□ 0.34
GSDMD-207ENST00000526469 BEAN1Q3B7T3 259 aa17.2■□□□□ 0.34
GSDMD-207ENST00000526469 ODF3L2Q3SX64 289 aa17.2■□□□□ 0.34
GSDMD-207ENST00000526469 PFN1P07737 140 aaKnown RBP17.19■□□□□ 0.34
GSDMD-207ENST00000526469 ELOBQ15370 118 aa17.19■□□□□ 0.34
GSDMD-207ENST00000526469 ACTL10Q5JWF8 245 aa17.19■□□□□ 0.34
GSDMD-207ENST00000526469 ZFAND2AQ8N6M9 145 aa17.19■□□□□ 0.34
GSDMD-207ENST00000526469 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.19■□□□□ 0.34
GSDMD-207ENST00000526469 A8MWL6 223 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 GPX1P07203 203 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 TSPOP30536 169 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 ZNF80P51504 273 aaPredicted RBP17.18■□□□□ 0.34
GSDMD-207ENST00000526469 APRG1Q8IVJ8 170 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 YPEL4Q96NS1 127 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 KNCNA6PVL3 124 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 OR2D3Q8NGH3 330 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 BTF3L4Q96K17 158 aa17.18■□□□□ 0.34
GSDMD-207ENST00000526469 A8MTW9 85 aa17.17■□□□□ 0.34
GSDMD-207ENST00000526469 H3BMM0 161 aa17.17■□□□□ 0.34
GSDMD-207ENST00000526469 SPATA3Q8NHX4 192 aa17.17■□□□□ 0.34
GSDMD-207ENST00000526469 TSKUQ8WUA8 353 aa17.17■□□□□ 0.34
GSDMD-207ENST00000526469 TRAV9-1A0A075B6T8 112 aa17.16■□□□□ 0.34
GSDMD-207ENST00000526469 SMIM27A0A1W2PRY6 76 aa17.16■□□□□ 0.34
GSDMD-207ENST00000526469 AGRNO00468 2067 aa17.16■□□□□ 0.34
GSDMD-207ENST00000526469 XKRY2A2RUG3 117 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 TMEM189A5PLL7 270 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 COLCA2A8K830 154 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 KLLNB2CW77 178 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 CA1P00915 261 aaPredicted RBP17.15■□□□□ 0.34
GSDMD-207ENST00000526469 IGKV3-20P01619 116 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 CLUHP3Q96NS8 147 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 GFRA4Q9GZZ7 299 aa17.15■□□□□ 0.34
GSDMD-207ENST00000526469 TRBV24-1A0A075B6N3 115 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 TRAV21A0A0B4J279 112 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 A0A1W2PPQ1 181 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 RPS20P60866 119 aaKnown RBP17.14■□□□□ 0.33
GSDMD-207ENST00000526469 VWFP04275 2813 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 FAM231BA6NCW3 169 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 J3KRW8 73 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 CDKN1BP46527 198 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 FAM3BP58499 235 aaPredicted RBP17.14■□□□□ 0.33
GSDMD-207ENST00000526469 ZNF124Q15973 351 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 PRR9Q5T870 116 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 Q6AWC8 147 aa17.14■□□□□ 0.33
GSDMD-207ENST00000526469 WIPF1O43516 503 aa17.13■□□□□ 0.33
GSDMD-207ENST00000526469 RNASE4P34096 147 aaKnown RBP17.13■□□□□ 0.33
GSDMD-207ENST00000526469 RPL19P84098 196 aaKnown RBP17.13■□□□□ 0.33
GSDMD-207ENST00000526469 AMTNQ6UX39 209 aa17.13■□□□□ 0.33
GSDMD-207ENST00000526469 STHQ8IWL8 128 aa17.13■□□□□ 0.33
GSDMD-207ENST00000526469 NAT8BQ9UHF3 227 aa17.13■□□□□ 0.33
GSDMD-207ENST00000526469 TGIF2-C20orf24A0A0A6YYL0 155 aa17.12■□□□□ 0.33
GSDMD-207ENST00000526469 ORM1P02763 201 aa17.12■□□□□ 0.33
GSDMD-207ENST00000526469 CD7P09564 240 aa17.12■□□□□ 0.33
GSDMD-207ENST00000526469 LINC01559Q495D7 138 aa17.12■□□□□ 0.33
GSDMD-207ENST00000526469 GTSCR1Q86UQ5 136 aa17.12■□□□□ 0.33
GSDMD-207ENST00000526469 PYGO2Q9BRQ0 406 aa17.12■□□□□ 0.33
GSDMD-207ENST00000526469 STAB1Q9NY15 2570 aa17.11■□□□□ 0.33
GSDMD-207ENST00000526469 IGLL1P15814 213 aa17.11■□□□□ 0.33
GSDMD-207ENST00000526469 TCL1AP56279 114 aa17.11■□□□□ 0.33
GSDMD-207ENST00000526469 NEU1Q99519 415 aa17.11■□□□□ 0.33
GSDMD-207ENST00000526469 C7orf71A4D174 169 aa17.1■□□□□ 0.33
GSDMD-207ENST00000526469 CXCL1P09341 107 aa17.1■□□□□ 0.33
GSDMD-207ENST00000526469 FAM210BQ96KR6 192 aa17.1■□□□□ 0.33
GSDMD-207ENST00000526469 HIGD1CA8MV81 97 aa17.1■□□□□ 0.33
GSDMD-207ENST00000526469 SPINK13Q1W4C9 94 aa17.1■□□□□ 0.33
GSDMD-207ENST00000526469 C19orf73Q9NVV2 129 aa17.1■□□□□ 0.33
GSDMD-207ENST00000526469 M0R2Z0 102 aa17.09■□□□□ 0.33
GSDMD-207ENST00000526469 RAB5AP20339 215 aa17.09■□□□□ 0.33
GSDMD-207ENST00000526469 PRR31Q5SQ13 230 aa17.08■□□□□ 0.32
GSDMD-207ENST00000526469 GFI1BQ5VTD9 330 aa17.08■□□□□ 0.32
GSDMD-207ENST00000526469 TRPT1Q86TN4 253 aaKnown RBP17.08■□□□□ 0.32
GSDMD-207ENST00000526469 TMSB15BA0A087X1C1 80 aa17.07■□□□□ 0.32
GSDMD-207ENST00000526469 AMBPP02760 352 aa17.07■□□□□ 0.32
GSDMD-207ENST00000526469 KIR3DS1Q14943 382 aa17.07■□□□□ 0.32
GSDMD-207ENST00000526469 NUP35Q8NFH5 326 aa17.07■□□□□ 0.32
GSDMD-207ENST00000526469 GTSF1Q8WW33 167 aa17.07■□□□□ 0.32
GSDMD-207ENST00000526469 RBMY1BA6NDE4 496 aaKnown RBP17.07■□□□□ 0.32
GSDMD-207ENST00000526469 RBMY1EA6NEQ0 496 aaKnown RBP17.07■□□□□ 0.32
GSDMD-207ENST00000526469 RBMY1DP0C7P1 496 aaKnown RBP17.07■□□□□ 0.32
GSDMD-207ENST00000526469 GZMBP10144 247 aa17.07■□□□□ 0.32
GSDMD-207ENST00000526469 FOXA3P55318 350 aaPredicted RBP17.07■□□□□ 0.32
GSDMD-207ENST00000526469 NUTF2P61970 127 aaKnown RBP17.07■□□□□ 0.32
GSDMD-207ENST00000526469 DNHD1Q96M86 4753 aa17.06■□□□□ 0.32
GSDMD-207ENST00000526469 IGKV3D-20A0A0C4DH25 116 aa17.06■□□□□ 0.32
GSDMD-207ENST00000526469 TYMSP04818 313 aa17.06■□□□□ 0.32
GSDMD-207ENST00000526469 C11orf21Q9P2W6 132 aa17.06■□□□□ 0.32
GSDMD-207ENST00000526469 NOTCH3Q9UM47 2321 aa17.05■□□□□ 0.32
GSDMD-207ENST00000526469 TRAV12-2A0A075B6T6 113 aa17.05■□□□□ 0.32
GSDMD-207ENST00000526469 TRAV12-3A0A0B4J271 114 aa17.05■□□□□ 0.32
GSDMD-207ENST00000526469 NAGKQ9UJ70 344 aa17.05■□□□□ 0.32
GSDMD-207ENST00000526469 ZNF324O75467 553 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms