RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 C11orf21Q9P2W6 132 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 LINC00614P0C842 121 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 C3orf79P0CE67 100 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 ZNF705DP0CH99 300 aaPredicted RBP12.07□□□□□ -0.48
USH1C-204ENST00000526313 ZNF705BP0CI00 300 aaPredicted RBP12.07□□□□□ -0.48
USH1C-204ENST00000526313 NTF3P20783 257 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 ZNF738Q8NE65 137 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 KIR2DL5BA0A0G2JN68 375 aa12.06□□□□□ -0.48
USH1C-204ENST00000526313 KIR2DL5BA0A0G2JPC4 375 aa12.06□□□□□ -0.48
USH1C-204ENST00000526313 RPLP1P05386 114 aaKnown RBP12.06□□□□□ -0.48
USH1C-204ENST00000526313 KRTDAPP60985 99 aa12.06□□□□□ -0.48
USH1C-204ENST00000526313 KIR2DL5AQ8N109 375 aa12.06□□□□□ -0.48
USH1C-204ENST00000526313 TEX15Q9BXT5 2789 aa12.06□□□□□ -0.48
USH1C-204ENST00000526313 KMT2BQ9UMN6 2715 aaPredicted RBP12.06□□□□□ -0.48
USH1C-204ENST00000526313 M0R2Z0 102 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 UFC1Q9Y3C8 167 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 FAM181BA6NEQ2 426 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 PLA2G2AP14555 144 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 TENM4Q6N022 2769 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 CHD6Q8TD26 2715 aa12.05□□□□□ -0.48
USH1C-204ENST00000526313 NBPF19A0A087WUL8 3843 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 C2orf70A6NJV1 201 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 M0QZ24 198 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 LGALS1P09382 135 aaKnown RBP12.04□□□□□ -0.48
USH1C-204ENST00000526313 TDRG1Q3Y452 100 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 UBE2E2Q96LR5 201 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 TRBV7-9A0A0J9YWB2 115 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 ZFAND2AQ8N6M9 145 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 OR10J6PQ8NGY7 276 aa12.04□□□□□ -0.48
USH1C-204ENST00000526313 EDN2P20800 178 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 TWIST1Q15672 202 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 MRPL51Q4U2R6 128 aaKnown RBP12.03□□□□□ -0.48
USH1C-204ENST00000526313 PRR9Q5T870 116 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 SAMD13Q5VXD3 122 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 EBLN2Q6P2I7 272 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 AMN1Q8IY45 258 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 C20orf144Q9BQM9 153 aa12.03□□□□□ -0.48
USH1C-204ENST00000526313 IGHV1-24A0A0C4DH33 117 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 LGALS9O00182 355 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 RAB4AP20338 218 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 MUC21Q5SSG8 566 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 WFDC11Q8NEX6 87 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 DCANP1Q8TF63 244 aa12.02□□□□□ -0.48
USH1C-204ENST00000526313 J3QKU1 62 aa12.02□□□□□ -0.49
USH1C-204ENST00000526313 RPL11P62913 178 aaKnown RBP12.02□□□□□ -0.49
USH1C-204ENST00000526313 TMEM86BQ8N661 226 aa12.02□□□□□ -0.49
USH1C-204ENST00000526313 OR5AL1P0C617 328 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 NDUFAF3Q9BU61 184 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 MSRB1Q9NZV6 116 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 ZNF469Q96JG9 3925 aaPredicted RBP12.01□□□□□ -0.49
USH1C-204ENST00000526313 DOPEY2Q9Y3R5 2298 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 IGHV4-4A0A075B6R2 117 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 D6R8Y8 96 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 Q6ZQT7 251 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
USH1C-204ENST00000526313 A0A1B0GV90 55 aa12□□□□□ -0.49
USH1C-204ENST00000526313 CRXO43186 299 aaPredicted RBP12□□□□□ -0.49
USH1C-204ENST00000526313 SNAI2O43623 268 aa12□□□□□ -0.49
USH1C-204ENST00000526313 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
USH1C-204ENST00000526313 DEFB1P60022 68 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 SSTP61278 116 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 LBHQ53QV2 105 aaPredicted RBP11.99□□□□□ -0.49
USH1C-204ENST00000526313 HIST2H2BCQ6DN03 193 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 VAMP8Q9BV40 100 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 ITPR3Q14573 2671 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 IGHV4OR15-8A0A075B7B6 117 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 A0A087WW49 117 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 ID1P41134 155 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 PMCHL1Q16048 86 aa11.99□□□□□ -0.49
USH1C-204ENST00000526313 TRAV21A0A0B4J279 112 aa11.98□□□□□ -0.49
USH1C-204ENST00000526313 F6UB75 175 aa11.98□□□□□ -0.49
USH1C-204ENST00000526313 CSN3P07498 182 aa11.98□□□□□ -0.49
USH1C-204ENST00000526313 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
USH1C-204ENST00000526313 IGKV3-7A0A075B6H7 116 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 LEPROTL1O95214 131 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 PPBPP02775 128 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 SRD5A1P18405 259 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 SIGLEC8Q9NYZ4 499 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 PDZD2O15018 2839 aa11.97□□□□□ -0.49
USH1C-204ENST00000526313 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.49
USH1C-204ENST00000526313 CKS2P33552 79 aa11.96□□□□□ -0.49
USH1C-204ENST00000526313 SYNJ2BPP57105 145 aa11.96□□□□□ -0.49
USH1C-204ENST00000526313 OR10AG1Q8NH19 301 aa11.96□□□□□ -0.49
USH1C-204ENST00000526313 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
USH1C-204ENST00000526313 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
USH1C-204ENST00000526313 PAM16Q9Y3D7 125 aa11.96□□□□□ -0.49
USH1C-204ENST00000526313 IFI27P40305 119 aaPredicted RBP11.96□□□□□ -0.5
USH1C-204ENST00000526313 CACNG7P62955 275 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms