RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MYH9P35579 1960 aaKnown RBP1.92□□□□□ -2.1
CSDE1-211ENST00000525970 SCN8AQ9UQD0 1980 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 BAZ2BQ9UIF8 2168 aaKnown RBP1.92□□□□□ -2.1
CSDE1-211ENST00000525970 AKAP11Q9UKA4 1901 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 MICAL3Q7RTP6 2002 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 A0A1B0GV90 55 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 KANTRA0A1W2PQU2 76 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 C5orf58C9J3I9 102 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 GADD45GO95257 159 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 SIX6O95475 246 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 TRGC2P03986 189 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 UBBP0CG47 229 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 MIFP14174 115 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 DNAJB13P59910 316 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 UBA52P62987 128 aaKnown RBP1.92□□□□□ -2.1
CSDE1-211ENST00000525970 PEA15Q15121 130 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 SCIMPQ6UWF3 145 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 ALKAL2Q6UX46 152 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 KRTAP13-1Q8IUC0 172 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 TOMM5Q8N4H5 51 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 OR2T35Q8NGX2 323 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 SFT2D1Q8WV19 159 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 CCDC115Q96NT0 180 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 SNRNP25Q9BV90 132 aaKnown RBP1.92□□□□□ -2.1
CSDE1-211ENST00000525970 DPY30Q9C005 99 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 CACYBPQ9HB71 228 aaKnown RBP1.92□□□□□ -2.1
CSDE1-211ENST00000525970 TMEM138Q9NPI0 162 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 NHP2Q9NX24 153 aaKnown RBP1.92□□□□□ -2.1
CSDE1-211ENST00000525970 COA4Q9NYJ1 87 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 OR52A1Q9UKL2 312 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 NUBP2Q9Y5Y2 271 aa1.92□□□□□ -2.1
CSDE1-211ENST00000525970 TAF1LQ8IZX4 1826 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 BRWD1Q9NSI6 2320 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 TRGV10A0A0A0MS01 117 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 TLCD2A6NGC4 264 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 ZNF670-ZNF695F2Z2N8 137 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 ARPC5O15511 151 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 IFNA17P01571 189 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 GPX2P18283 190 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 S100A3P33764 101 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 ETV6P41212 452 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 DYNLT3P51808 116 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 RPL38P63173 70 aaKnown RBP1.91□□□□□ -2.1
CSDE1-211ENST00000525970 EMX2Q04743 252 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 RPS27LQ71UM5 84 aaKnown RBP1.91□□□□□ -2.1
CSDE1-211ENST00000525970 OR8J3Q8NGG0 315 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 MBD3L1Q8WWY6 194 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 MAFIPQ8WZ33 124 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 ARL11Q969Q4 196 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 TMEM203Q969S6 136 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 TAS2R4Q9NYW5 299 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 V9GYH0 126 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 FOCADQ5VW36 1801 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 ARFGEF1Q9Y6D6 1849 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 KIAA1551Q9HCM1 1747 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 LRP5O75197 1615 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 NRXN3Q9Y4C0 1643 aa1.91□□□□□ -2.1
CSDE1-211ENST00000525970 RBBP6Q7Z6E9 1792 aaKnown RBP1.9□□□□□ -2.1
CSDE1-211ENST00000525970 NHSQ6T4R5 1651 aa1.9□□□□□ -2.1
CSDE1-211ENST00000525970 MEIKINA0A087WXM9 373 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 A0A096LPI6 279 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 LOC285095A0A1B0GVY8 99 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 E7EQ34 232 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 M0R129 80 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 S100A11P31949 105 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 FAUP35544 74 aaKnown RBP1.9□□□□□ -2.11
CSDE1-211ENST00000525970 RBP2P50120 134 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 FAM74A1Q5RGS3 127 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 FKBP1CQ5VVH2 108 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 NCBP2-AS2Q69YL0 99 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 TOMM20LQ6UXN7 152 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 SOSTDC1Q6X4U4 206 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 C12orf29Q8N999 325 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 OR2T10Q8NGZ9 312 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 LRTM1Q9HBL6 345 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 BCL2L10Q9HD36 194 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 SMCO4Q9NRQ5 59 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 COL24A1Q17RW2 1714 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 RTTNQ86VV8 2226 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 PCNX2A6NKB5 2137 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 ALS2Q96Q42 1657 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 TNRC6CQ9HCJ0 1690 aaKnown RBP1.9□□□□□ -2.11
CSDE1-211ENST00000525970 ROBO1Q9Y6N7 1651 aa1.9□□□□□ -2.11
CSDE1-211ENST00000525970 CDK5RAP2Q96SN8 1893 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 TANC1Q9C0D5 1861 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 FXYD1O00168 92 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 NDUFB3O43676 98 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 MPC2O95563 127 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 CFDP00746 253 aaPredicted RBP1.89□□□□□ -2.11
CSDE1-211ENST00000525970 BAALC-AS2P0C853 105 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 ZNF25P17030 456 aaPredicted RBP1.89□□□□□ -2.11
CSDE1-211ENST00000525970 CAV3P56539 151 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 NDUFA6P56556 154 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 PKIAP61925 76 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 RPS25P62851 125 aaKnown RBP1.89□□□□□ -2.11
CSDE1-211ENST00000525970 ELOBQ15370 118 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 SPANXN5Q5MJ07 72 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 C1orf140Q5VVS0 124 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 PATE2Q6UY27 113 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 Q8IYB0 196 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms