RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SULT1C4O75897 302 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 IGF2P01344 180 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 MPC1LP0DKB6 136 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 ERP29P30040 261 aaKnown RBP-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 SPRR2BP35325 72 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 MYL6P60660 151 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 KLKP1Q107X0 134 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 BCL2L15Q5TBC7 163 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 EIF5AL1Q6IS14 154 aaKnown RBP-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 IZUMO2Q6UXV1 221 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 PHF5AQ7RTV0 110 aaKnown RBP-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 OTUD6BQ8N6M0 293 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 OR4K15Q8NH41 348 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 FAM213BQ8TBF2 198 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 TRIM4Q9C037 500 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 CACYBPQ9HB71 228 aaKnown RBP-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 NKIRAS1Q9NYS0 192 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 NAT8BQ9UHF3 227 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 NBASA2RRP1 2371 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 KIAA1109Q2LD37 5005 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 VPS13BQ7Z7G8 4022 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 KDM5CP41229 1560 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 FGD6Q6ZV73 1430 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 SBF2Q86WG5 1849 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 PATJQ8NI35 1801 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 ZNF236Q9UL36 1845 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 TMEM114B3SHH9 223 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 FXYD1O00168 92 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 RER1O15258 196 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 CST7O76096 145 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 LYPLA2O95372 231 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 IFNA7P01567 189 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 TRGC2P03986 189 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 GYPBP06028 91 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 CST2P09228 141 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 PHBP35232 272 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 ERVS71-1P61550 626 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 COX6A2Q02221 97 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 AESQ08117 197 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 DIAPH2-AS1Q14236 149 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 NEDD8Q15843 81 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 AKIRIN2Q53H80 203 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 CCDC122Q5T0U0 273 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 FKBP1CQ5VVH2 108 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 GOLT1AQ6ZVE7 132 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 TRAPPC5Q8IUR0 188 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 FAM216BQ8N7L0 139 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 OR8J2Q8NGG1 315 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 GNPDA2Q8TDQ7 276 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 DIRC1Q969H9 104 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 ARL5BQ96KC2 179 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 GPX7Q96SL4 187 aaPredicted RBP-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 EPG5Q9HCE0 2579 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 MUC17Q685J3 4493 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 NWD2Q9ULI1 1742 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 DLC1Q96QB1 1528 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 DNAH9Q9NYC9 4486 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 FAM135BQ49AJ0 1406 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 TRAPPC8Q9Y2L5 1435 aa-0.38□□□□□ -2.47
CSDE1-210ENST00000525878 HTTP42858 3142 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 PTPRMP28827 1452 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 GOLGA3Q08378 1498 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 PCNX1Q96RV3 2341 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 ADCY9O60503 1353 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 GOLGA4Q13439 2230 aaKnown RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 A0A087WTM6 91 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 GVQW2A0A096LPI5 108 aaPredicted RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 A0A096LPI6 279 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 H7BYZ3 331 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 HMGB3O15347 200 aaKnown RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 ZZEF1O43149 2961 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 HIST1H2BKO60814 126 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 IFNA6P05013 189 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 HIST1H2BJP06899 126 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 RPS17P08708 135 aaKnown RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 NMBP08949 121 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 NFYBP25208 207 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 TMBIM6P55061 237 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 NCALDP61601 193 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 HSPE1P61604 102 aaKnown RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 SNRPD3P62318 126 aaKnown RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 CCL7P80098 99 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 EMX2Q04743 252 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 COTL1Q14019 142 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 POU6F1Q14863 301 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 TAF1AQ15573 450 aaPredicted RBP-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 MSMO1Q15800 293 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 KRTAP19-8Q3LI54 63 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 TCTEX1D1Q8N7M0 179 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 C5orf17Q8NAS9 161 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 OR10X1Q8NGY0 326 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 CCDC42Q96M95 316 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 OR4C12Q96R67 309 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 SIGMAR1Q99720 223 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 PRR15LQ9BU68 103 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 EFCAB11Q9BUY7 163 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 OR2H1Q9GZK4 316 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 MYH7P12883 1935 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms