RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 Q6ZTC4 211 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 GINS4Q9BRT9 223 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 ZNF222Q9UK12 451 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 TMEM14AQ9Y6G1 99 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 HCFC1P51610 2035 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 NUP205Q92621 2012 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 TRIOO75962 3097 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 A0A0D9SG52 128 aa3□□□□□ -1.93
CD44-213ENST00000525209 NDUFAF8A1L188 74 aa3□□□□□ -1.93
CD44-213ENST00000525209 GRIFINA4D1Z8 144 aa3□□□□□ -1.93
CD44-213ENST00000525209 C5orf67F2Z3F1 127 aa3□□□□□ -1.93
CD44-213ENST00000525209 H3BMM0 161 aa3□□□□□ -1.93
CD44-213ENST00000525209 LY6HO94772 140 aa3□□□□□ -1.93
CD44-213ENST00000525209 NPYP01303 97 aa3□□□□□ -1.93
CD44-213ENST00000525209 CRIP2P52943 208 aaPredicted RBP3□□□□□ -1.93
CD44-213ENST00000525209 EBI3Q14213 229 aa3□□□□□ -1.93
CD44-213ENST00000525209 MIAQ16674 131 aa3□□□□□ -1.93
CD44-213ENST00000525209 Q56UQ5 140 aa3□□□□□ -1.93
CD44-213ENST00000525209 CLLU1Q5K131 121 aa3□□□□□ -1.93
CD44-213ENST00000525209 NOXRED1Q6NXP6 359 aa3□□□□□ -1.93
CD44-213ENST00000525209 SDIM1Q6ZPB5 146 aa3□□□□□ -1.93
CD44-213ENST00000525209 Q6ZUT4 128 aa3□□□□□ -1.93
CD44-213ENST00000525209 Q8N2B8 174 aa3□□□□□ -1.93
CD44-213ENST00000525209 SVBPQ8N300 66 aa3□□□□□ -1.93
CD44-213ENST00000525209 LINC00471Q8N535 108 aa3□□□□□ -1.93
CD44-213ENST00000525209 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
CD44-213ENST00000525209 PFN4Q8NHR9 129 aa3□□□□□ -1.93
CD44-213ENST00000525209 RHOXF1Q8NHV9 184 aa3□□□□□ -1.93
CD44-213ENST00000525209 UBE2WQ96B02 151 aa3□□□□□ -1.93
CD44-213ENST00000525209 LINC00526Q96FQ7 95 aa3□□□□□ -1.93
CD44-213ENST00000525209 SEC11CQ9BY50 192 aa3□□□□□ -1.93
CD44-213ENST00000525209 SAR1AQ9NR31 198 aa3□□□□□ -1.93
CD44-213ENST00000525209 FKBP11Q9NYL4 201 aa3□□□□□ -1.93
CD44-213ENST00000525209 OR5V1Q9UGF6 321 aa3□□□□□ -1.93
CD44-213ENST00000525209 NOP16Q9Y3C1 178 aaKnown RBP3□□□□□ -1.93
CD44-213ENST00000525209 ANKRD12Q6UB98 2062 aa3□□□□□ -1.93
CD44-213ENST00000525209 USP34Q70CQ2 3546 aa3□□□□□ -1.93
CD44-213ENST00000525209 TPRP12270 2363 aaKnown RBP3□□□□□ -1.93
CD44-213ENST00000525209 POLEQ07864 2286 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 PATJQ8NI35 1801 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 IGLV3-9A0A075B6K5 115 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 TCRBV3S1A0A5B6 114 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 C19orf71A6NCJ1 209 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 C11orf94C9JXX5 98 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 H3BT86 120 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 PITX3O75364 302 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 ZNF432O94892 652 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 NOVP48745 357 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 LSM3P62310 102 aaKnown RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 KLRD1Q13241 179 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 C9orf153Q5TBE3 101 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 Q6AWC8 147 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 ZNF660Q6AZW8 331 aaPredicted RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 SMCR5Q8TEV8 140 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 RBMXL1Q96E39 390 aaKnown RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 DPY30Q9C005 99 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 LINC00574Q9H8X3 128 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 ZNF355PQ9NSJ1 428 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 SERP1Q9Y6X1 66 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 THADAQ6YHU6 1953 aa2.99□□□□□ -1.93
CD44-213ENST00000525209 MAP1BP46821 2468 aaKnown RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 EP300Q09472 2414 aaPredicted RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 TDRD6O60522 2096 aaKnown RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 PDCD11Q14690 1871 aaKnown RBP2.99□□□□□ -1.93
CD44-213ENST00000525209 BAHCC1Q9P281 2608 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.98□□□□□ -1.93
CD44-213ENST00000525209 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.98□□□□□ -1.93
CD44-213ENST00000525209 TRGV5A0A0B4J1U4 118 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 C3orf85A0A1B0GTC6 90 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 SMIM31A0A1B0GVY4 71 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 APOC4-APOC2K7ER74 178 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 OR1I1O60431 355 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 TCL1BO95988 128 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 APOC2P02655 101 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 CD3DP04234 171 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 CRYGAP11844 174 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 DYNLT1P63172 113 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.98□□□□□ -1.93
CD44-213ENST00000525209 OTOSQ8NHW6 89 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 PKMYT1Q99640 499 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 TRAPPC1Q9Y5R8 145 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 U3KQK5 164 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 CROCCQ5TZA2 2017 aa2.98□□□□□ -1.93
CD44-213ENST00000525209 SPAG17Q6Q759 2223 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 ANAPC1Q9H1A4 1944 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 ADAMTS9Q9P2N4 1935 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 KIF26AQ9ULI4 1882 aaPredicted RBP2.97□□□□□ -1.93
CD44-213ENST00000525209 A0A1W2PRS3 328 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 FAM168BA1KXE4 195 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 PINLYPA6NC86 204 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 MCRIP1C9JLW8 97 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 TMEM262E9PQX1 116 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 CCL16O15467 120 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 LHBP01229 141 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 PMP2P02689 132 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 MSMBP08118 114 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 CCL4P13236 92 aa2.97□□□□□ -1.93
CD44-213ENST00000525209 TPT1P13693 172 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms