RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 FOXI2Q6ZQN5 318 aa10.23□□□□□ -0.77
TRIM3-203ENST00000525074 C20orf78Q9BR46 151 aa10.23□□□□□ -0.77
TRIM3-203ENST00000525074 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
TRIM3-203ENST00000525074 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
TRIM3-203ENST00000525074 TRBV6-1A0A0K0K1D8 114 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 A0A1B0GWB2 263 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 ZNF575Q86XF7 245 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 FAM57AQ8TBR7 257 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 ATP6V0BQ99437 205 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 CYSLTR1Q9Y271 337 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 UTP20O75691 2785 aaKnown RBP10.22□□□□□ -0.77
TRIM3-203ENST00000525074 E7EQL1 145 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 E9PLD3 99 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 J3KRW8 73 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 DTX2Q86UW9 622 aa10.22□□□□□ -0.77
TRIM3-203ENST00000525074 GAGE13Q4V321 117 aa10.21□□□□□ -0.77
TRIM3-203ENST00000525074 RNASE6Q93091 150 aaKnown RBP10.21□□□□□ -0.77
TRIM3-203ENST00000525074 ONECUT1Q9UBC0 465 aa10.21□□□□□ -0.77
TRIM3-203ENST00000525074 TGFAP01135 160 aa10.21□□□□□ -0.78
TRIM3-203ENST00000525074 IGLV1-47P01700 117 aa10.21□□□□□ -0.78
TRIM3-203ENST00000525074 CKS1BP61024 79 aa10.21□□□□□ -0.78
TRIM3-203ENST00000525074 DYNAPQ8N1N2 210 aa10.21□□□□□ -0.78
TRIM3-203ENST00000525074 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.78
TRIM3-203ENST00000525074 A0A1B0GV72 72 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 FAM90A27PA6NNH2 459 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 CEACAM4O75871 244 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 KLRD1Q13241 179 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 IL17RELQ6ZVW7 336 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 F8W1H4 67 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 J3QR89 54 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 HIGD1BQ9P298 99 aa10.2□□□□□ -0.78
TRIM3-203ENST00000525074 TTC9CQ8N5M4 171 aa10.19□□□□□ -0.78
TRIM3-203ENST00000525074 CFHR4Q92496 578 aa10.19□□□□□ -0.78
TRIM3-203ENST00000525074 ZMAT4Q9H898 229 aa10.19□□□□□ -0.78
TRIM3-203ENST00000525074 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
TRIM3-203ENST00000525074 NCBP2LA6PVI3 153 aaKnown RBP10.19□□□□□ -0.78
TRIM3-203ENST00000525074 ZNF418Q8TF45 676 aaPredicted RBP10.19□□□□□ -0.78
TRIM3-203ENST00000525074 PTH2Q96A98 100 aa10.19□□□□□ -0.78
TRIM3-203ENST00000525074 NDUFS8O00217 210 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 IGHG4P01861 327 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 BMI1P35226 326 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 MYOZ3Q8TDC0 251 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 NXT2Q9NPJ8 142 aaKnown RBP10.18□□□□□ -0.78
TRIM3-203ENST00000525074 SMAD5-AS1Q9Y6J3 95 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM3-203ENST00000525074 Q8NA96 180 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 NUP37Q8NFH4 326 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 GLMPQ8WWB7 406 aa10.18□□□□□ -0.78
TRIM3-203ENST00000525074 LOC107984156A0A0G2JMH3 177 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
TRIM3-203ENST00000525074 ARL17AQ8IVW1 177 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 APOMO95445 188 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 SCGB2A2Q13296 93 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 C8orf31Q8N9H6 132 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.17□□□□□ -0.78
TRIM3-203ENST00000525074 FABP5P3A8MUU1 101 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 MFAP4P55083 255 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 NDPQ00604 133 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 CDSNQ15517 529 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 SYT8Q8NBV8 401 aa10.17□□□□□ -0.78
TRIM3-203ENST00000525074 SHISA9B4DS77 424 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 F8W735 103 aaPredicted RBP10.16□□□□□ -0.78
TRIM3-203ENST00000525074 RRN3P1Q2M238 152 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 C21orf62Q9NYP8 219 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 HIVEP3Q5T1R4 2406 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 IGKV3D-20A0A0C4DH25 116 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
TRIM3-203ENST00000525074 EMP1P54849 157 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 PDE6HQ13956 83 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 ASCL5Q7RTU5 278 aa10.16□□□□□ -0.78
TRIM3-203ENST00000525074 MRPL16Q9NX20 251 aaKnown RBP10.16□□□□□ -0.78
TRIM3-203ENST00000525074 NBR2O15453 112 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 ATP5LO75964 103 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 IGFL3Q6UXB1 125 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 FOXC1Q12948 553 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 Q8N8P6 123 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 VKORC1Q9BQB6 163 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
TRIM3-203ENST00000525074 PSMB2P49721 201 aa10.15□□□□□ -0.79
TRIM3-203ENST00000525074 LAGE3Q14657 143 aa10.15□□□□□ -0.79
TRIM3-203ENST00000525074 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.79
TRIM3-203ENST00000525074 PRO0461Q9UI25 63 aa10.15□□□□□ -0.79
TRIM3-203ENST00000525074 HLA-DRB4P13762 266 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 CRYBA4P53673 196 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 HLA-DRB4X5D2U9 266 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 OR11H12B2RN74 326 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 SMPXQ9UHP9 88 aa10.14□□□□□ -0.79
TRIM3-203ENST00000525074 IGLV2-18A0A075B6J9 118 aa10.13□□□□□ -0.79
TRIM3-203ENST00000525074 MT-ATP8P03928 68 aa10.13□□□□□ -0.79
TRIM3-203ENST00000525074 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms