RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 IFITM3Q01628 133 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 C8orf49Q96NF6 230 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 ARPC5LQ9BPX5 153 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 PRO0255Q9UI72 69 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 TNFRSF18Q9Y5U5 241 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 TRBV7-9A0A0J9YWB2 115 aa12.83□□□□□ -0.36
PTP4A3-206ENST00000524028 MUC21Q5SSG8 566 aa12.83□□□□□ -0.36
PTP4A3-206ENST00000524028 LYPD5Q6UWN5 251 aa12.83□□□□□ -0.36
PTP4A3-206ENST00000524028 ENKURQ8TC29 256 aa12.83□□□□□ -0.36
PTP4A3-206ENST00000524028 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
PTP4A3-206ENST00000524028 MDFICQ9P1T7 246 aa12.83□□□□□ -0.36
PTP4A3-206ENST00000524028 OR7C2O60412 319 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 PRAF2O60831 178 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 H2BFSP57053 126 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 ZNF266Q14584 549 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 KCNIP2Q9NS61 270 aa12.82□□□□□ -0.36
PTP4A3-206ENST00000524028 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
PTP4A3-206ENST00000524028 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
PTP4A3-206ENST00000524028 UPK1BO75841 260 aa12.81□□□□□ -0.36
PTP4A3-206ENST00000524028 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.369e-7■■■□□ 16.8
PTP4A3-206ENST00000524028 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
PTP4A3-206ENST00000524028 ATP5SQ99766 215 aa12.81□□□□□ -0.36
PTP4A3-206ENST00000524028 EIF3GO75821 320 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 CSN1S1P47710 185 aa12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 CYCSP99999 105 aaKnown RBP12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 SLAQ13239 276 aa12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 PPP1R1CQ8WVI7 109 aa12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 ZNF479Q96JC4 524 aa12.8□□□□□ -0.36
PTP4A3-206ENST00000524028 DIRC3C9JPN6 131 aa12.79□□□□□ -0.36
PTP4A3-206ENST00000524028 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
PTP4A3-206ENST00000524028 MRPL23Q16540 153 aaKnown RBP12.79□□□□□ -0.36
PTP4A3-206ENST00000524028 Q6AWC8 147 aa12.79□□□□□ -0.36
PTP4A3-206ENST00000524028 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
PTP4A3-206ENST00000524028 TRGV4A0A0C4DH28 118 aa12.78□□□□□ -0.36
PTP4A3-206ENST00000524028 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
PTP4A3-206ENST00000524028 NEGR1Q7Z3B1 354 aa12.78□□□□□ -0.36
PTP4A3-206ENST00000524028 IQCF2Q8IXL9 164 aa12.78□□□□□ -0.36
PTP4A3-206ENST00000524028 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
PTP4A3-206ENST00000524028 RASL10AQ92737 203 aa12.78□□□□□ -0.36
PTP4A3-206ENST00000524028 K7EQD1 137 aa12.77□□□□□ -0.37
PTP4A3-206ENST00000524028 OR10G4Q8NGN3 311 aa12.77□□□□□ -0.37
PTP4A3-206ENST00000524028 HYLS1Q96M11 299 aa12.77□□□□□ -0.37
PTP4A3-206ENST00000524028 SMIM3Q9BZL3 60 aa12.77□□□□□ -0.37
PTP4A3-206ENST00000524028 MPC2O95563 127 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 KHDC3LQ587J8 217 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 MARVELD1Q9BSK0 173 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 SPXQ9BT56 116 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 PGPEP1Q9NXJ5 209 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 LENEPQ9Y5L5 61 aa12.76□□□□□ -0.37
PTP4A3-206ENST00000524028 GYPEP15421 78 aa12.75□□□□□ -0.37
PTP4A3-206ENST00000524028 RPL12P30050 165 aaKnown RBP12.75□□□□□ -0.37
PTP4A3-206ENST00000524028 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
PTP4A3-206ENST00000524028 WFDC10BQ8IUB3 73 aa12.75□□□□□ -0.37
PTP4A3-206ENST00000524028 TMED6Q8WW62 240 aa12.75□□□□□ -0.37
PTP4A3-206ENST00000524028 TRGV11A0A075B6L2 103 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 PGPA6NDG6 321 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 GNRH2O43555 120 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 IFNA5P01569 189 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 SRIP30626 198 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 TAS2R45P59539 299 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 SCGB1C1Q8TD33 95 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 MBD2Q9UBB5 411 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 NAGKQ9UJ70 344 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 LY96Q9Y6Y9 160 aa12.74□□□□□ -0.37
PTP4A3-206ENST00000524028 ERVFC1-1P60608 527 aa12.73□□□□□ -0.37
PTP4A3-206ENST00000524028 A0A087WTM6 91 aa12.72□□□□□ -0.37
PTP4A3-206ENST00000524028 IGHV3-16A0A0C4DH30 117 aa12.72□□□□□ -0.37
PTP4A3-206ENST00000524028 SSNA1O43805 119 aa12.72□□□□□ -0.37
PTP4A3-206ENST00000524028 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
PTP4A3-206ENST00000524028 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
PTP4A3-206ENST00000524028 TRAV9-2A0A087WT02 112 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 TRAV8-1A0A0A6YYK1 113 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 TRAV4A0A0B4J268 109 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 F6UZH7 168 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 EREGO14944 169 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 ORM1P02763 201 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 PET100P0DJ07 73 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 XGP55808 180 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 CMTM2Q8TAZ6 248 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 PCNPQ8WW12 178 aaKnown RBP12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
PTP4A3-206ENST00000524028 M0R2P5 195 aa12.7□□□□□ -0.38
PTP4A3-206ENST00000524028 RAB2AP61019 212 aa12.7□□□□□ -0.38
PTP4A3-206ENST00000524028 CDPF1Q6NVV7 123 aa12.7□□□□□ -0.38
PTP4A3-206ENST00000524028 OR4C5Q8NGB2 326 aa12.7□□□□□ -0.38
PTP4A3-206ENST00000524028 A6NHS1 94 aa12.69□□□□□ -0.38
PTP4A3-206ENST00000524028 HMGB3O15347 200 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms