RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF546Q86UE3 836 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 FAM25AB3EWG3 89 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 FAM25CB3EWG5 89 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 FAM25GB3EWG6 89 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 FNDC10F2Z333 226 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 AGPAT2O15120 278 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 ANXA3P12429 323 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 NEDD8Q15843 81 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 DGAT2L7PQ6IED9 249 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 IZUMO2Q6UXV1 221 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 RAB2BQ8WUD1 216 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 UBE2WQ96B02 151 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 ZC2HC1AQ96GY0 325 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 C2orf50Q96LR7 162 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 OR51M1Q9H341 326 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
NKX3-1-202ENST00000523261 TRBV7-9A0A0J9YWB2 115 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 PHOX2AO14813 284 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 PRSS1P07477 247 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 HIST1H1EP10412 219 aaKnown RBP8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 SSBP1Q04837 148 aaKnown RBP8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 ZNF266Q14584 549 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 NIT1Q86X76 327 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 EXOC3-AS1Q8N2X6 119 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 Q8TAT8 98 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 PRRT1Q99946 306 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 SH3BGRL3Q9H299 93 aa8.75□□□□□ -1.01
NKX3-1-202ENST00000523261 PIGBOS1A0A0B4J2F0 54 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 SEC11BP0C7V7 166 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 ZNF138P52744 262 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 Q6AWC8 147 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 FAM159AQ6UWV7 190 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 DPPA3Q6W0C5 159 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 CCDC59Q9P031 241 aaKnown RBP8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 EXTL2Q9UBQ6 330 aa8.74□□□□□ -1.01
NKX3-1-202ENST00000523261 A0A087WYN8 130 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 AKAIN1P0CW23 69 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 LINC00694P0DN24 101 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 RAB31Q13636 194 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 PDE6HQ13956 83 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 PSENENQ9NZ42 101 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 RAB26Q9ULW5 256 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 RABL2BQ9UNT1 228 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 URGCP-MRPS24S4R325 110 aa8.73□□□□□ -1.01
NKX3-1-202ENST00000523261 IGHV3-73A0A0B4J1V6 119 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 C5orf51A6NDU8 294 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 GNRH2O43555 120 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 CIDEAO60543 219 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 CLVS1Q8IUQ0 354 aaPredicted RBP8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 C15orf40Q8WUR7 153 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 SCGB3A2Q96PL1 93 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 MGST2Q99735 147 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 SOSTQ9BQB4 213 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 MGAT4CQ9UBM8 478 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 TIMM9Q9Y5J7 89 aa8.72□□□□□ -1.01
NKX3-1-202ENST00000523261 A0A087WWC5 75 aa8.71□□□□□ -1.02
NKX3-1-202ENST00000523261 METTL15P1P0C7V9 234 aa8.71□□□□□ -1.02
NKX3-1-202ENST00000523261 RPL19P84098 196 aaKnown RBP8.71□□□□□ -1.02
NKX3-1-202ENST00000523261 TMEM14EPQ6UXP3 125 aa8.71□□□□□ -1.02
NKX3-1-202ENST00000523261 OR10G9Q8NGN4 311 aa8.71□□□□□ -1.02
NKX3-1-202ENST00000523261 PRR3P79522 188 aaKnown RBP8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 ID3Q02535 119 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 CYB561D1Q8N8Q1 229 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 AAMDCQ9H7C9 122 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 NAGKQ9UJ70 344 aa8.7□□□□□ -1.02
NKX3-1-202ENST00000523261 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 INPP1P49441 399 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 Q0VG73 95 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 GAGE1Q13065 139 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 GAGE4Q13068 117 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 GAGE5Q13069 117 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 MZT2AQ6P582 158 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 VCX3BQ9H321 246 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 CRCT1Q9UGL9 99 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 SCP2D1Q9UJQ7 156 aa8.69□□□□□ -1.02
NKX3-1-202ENST00000523261 TYMSP04818 313 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 HOXB5P09067 269 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 PYYP10082 97 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 NCS1P62166 190 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 ARL16Q0P5N6 197 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 ELOBQ15370 118 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 MIC13Q5XKP0 118 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 Q6ZRG5 221 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 OR1L4Q8NGR5 311 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 SMIM4Q8WVI0 70 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 SMIM8Q96KF7 97 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms