RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 ICOSQ9Y6W8 199 aa13.59□□□□□ -0.23
CERNA3-201ENST00000521403 INMT-MINDY4F8WBC2 141 aa13.58□□□□□ -0.24
CERNA3-201ENST00000521403 PRAF2O60831 178 aa13.58□□□□□ -0.24
CERNA3-201ENST00000521403 UBE2L3P68036 154 aaKnown RBP13.58□□□□□ -0.24
CERNA3-201ENST00000521403 ZNF415Q09FC8 603 aa13.58□□□□□ -0.24
CERNA3-201ENST00000521403 MUC21Q5SSG8 566 aa13.58□□□□□ -0.24
CERNA3-201ENST00000521403 PPP1R1CQ8WVI7 109 aa13.58□□□□□ -0.24
CERNA3-201ENST00000521403 ATP5SQ99766 215 aa13.58□□□□□ -0.24
CERNA3-201ENST00000521403 APOBP04114 4563 aaKnown RBP13.57□□□□□ -0.24
CERNA3-201ENST00000521403 SIVA1O15304 175 aa13.57□□□□□ -0.24
CERNA3-201ENST00000521403 BTF3P20290 206 aaKnown RBP13.57□□□□□ -0.24
CERNA3-201ENST00000521403 H2BFSP57053 126 aa13.57□□□□□ -0.24
CERNA3-201ENST00000521403 LINC00315P59091 139 aa13.57□□□□□ -0.24
CERNA3-201ENST00000521403 FFAR4Q5NUL3 377 aa13.57□□□□□ -0.24
CERNA3-201ENST00000521403 PRO0255Q9UI72 69 aa13.57□□□□□ -0.24
CERNA3-201ENST00000521403 TRBV7-9A0A0J9YWB2 115 aa13.56□□□□□ -0.24
CERNA3-201ENST00000521403 NXPH4O95158 308 aa13.56□□□□□ -0.24
CERNA3-201ENST00000521403 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
CERNA3-201ENST00000521403 C8orf49Q96NF6 230 aa13.56□□□□□ -0.24
CERNA3-201ENST00000521403 SMIM3Q9BZL3 60 aa13.56□□□□□ -0.24
CERNA3-201ENST00000521403 HHLA3Q9XRX5 114 aa13.56□□□□□ -0.24
CERNA3-201ENST00000521403 RBAKDNA6NC62 111 aa13.55□□□□□ -0.24
CERNA3-201ENST00000521403 CRYBA4P53673 196 aa13.55□□□□□ -0.24
CERNA3-201ENST00000521403 KHDC3LQ587J8 217 aa13.55□□□□□ -0.24
CERNA3-201ENST00000521403 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
CERNA3-201ENST00000521403 SCGB1C1Q8TD33 95 aa13.55□□□□□ -0.24
CERNA3-201ENST00000521403 HSPB11Q9Y547 144 aa13.55□□□□□ -0.24
CERNA3-201ENST00000521403 DNAH5Q8TE73 4624 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 SSNA1O43805 119 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 EIF3GO75821 320 aaKnown RBP eCLIP13.54□□□□□ -0.24
CERNA3-201ENST00000521403 IFNA5P01569 189 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 PET100P0DJ07 73 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 TAS2R45P59539 299 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 SLAQ13239 276 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 ZNF266Q14584 549 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 HYLS1Q96M11 299 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 MDFICQ9P1T7 246 aa13.54□□□□□ -0.24
CERNA3-201ENST00000521403 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
CERNA3-201ENST00000521403 FHL2Q14192 279 aa13.53□□□□□ -0.24
CERNA3-201ENST00000521403 MRPL23Q16540 153 aaKnown RBP13.53□□□□□ -0.24
CERNA3-201ENST00000521403 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
CERNA3-201ENST00000521403 NAGKQ9UJ70 344 aa13.53□□□□□ -0.24
CERNA3-201ENST00000521403 RPH3ALQ9UNE2 315 aa13.53□□□□□ -0.24
CERNA3-201ENST00000521403 DIRC3C9JPN6 131 aa13.52□□□□□ -0.25
CERNA3-201ENST00000521403 MPC2O95563 127 aa13.52□□□□□ -0.25
CERNA3-201ENST00000521403 TMEM183BQ1AE95 376 aa13.52□□□□□ -0.25
CERNA3-201ENST00000521403 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.25
CERNA3-201ENST00000521403 TMEM183AQ8IXX5 376 aa13.52□□□□□ -0.25
CERNA3-201ENST00000521403 MARVELD1Q9BSK0 173 aa13.52□□□□□ -0.25
CERNA3-201ENST00000521403 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
CERNA3-201ENST00000521403 RPL12P30050 165 aaKnown RBP13.51□□□□□ -0.25
CERNA3-201ENST00000521403 LYPD5Q6UWN5 251 aa13.51□□□□□ -0.25
CERNA3-201ENST00000521403 NEGR1Q7Z3B1 354 aa13.51□□□□□ -0.25
CERNA3-201ENST00000521403 CMTM2Q8TAZ6 248 aa13.51□□□□□ -0.25
CERNA3-201ENST00000521403 TRGV11A0A075B6L2 103 aa13.5□□□□□ -0.25
CERNA3-201ENST00000521403 Q6AWC8 147 aa13.5□□□□□ -0.25
CERNA3-201ENST00000521403 Q6ZRN7 208 aaPredicted RBP13.5□□□□□ -0.25
CERNA3-201ENST00000521403 ZNF479Q96JC4 524 aa13.5□□□□□ -0.25
CERNA3-201ENST00000521403 OTORQ9NRC9 128 aa13.5□□□□□ -0.25
CERNA3-201ENST00000521403 MBD2Q9UBB5 411 aa13.5□□□□□ -0.25
CERNA3-201ENST00000521403 LENEPQ9Y5L5 61 aa13.5□□□□□ -0.25
CERNA3-201ENST00000521403 PGPA6NDG6 321 aa13.49□□□□□ -0.25
CERNA3-201ENST00000521403 SRIP30626 198 aa13.49□□□□□ -0.25
CERNA3-201ENST00000521403 FAM74A1Q5RGS3 127 aa13.49□□□□□ -0.25
CERNA3-201ENST00000521403 PCNPQ8WW12 178 aaKnown RBP13.49□□□□□ -0.25
CERNA3-201ENST00000521403 TNFRSF18Q9Y5U5 241 aa13.49□□□□□ -0.25
CERNA3-201ENST00000521403 K7EQD1 137 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 DEFA1P59665 94 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 DEFA3P59666 94 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 Q8N1X5 172 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 RASL10AQ92737 203 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 SPXQ9BT56 116 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 SCRT2Q9NQ03 307 aa13.48□□□□□ -0.25
CERNA3-201ENST00000521403 A0A1W2PPV4 95 aa13.47□□□□□ -0.25
CERNA3-201ENST00000521403 EREGO14944 169 aa13.47□□□□□ -0.25
CERNA3-201ENST00000521403 GYPEP15421 78 aa13.47□□□□□ -0.25
CERNA3-201ENST00000521403 ACOT6Q3I5F7 207 aaPredicted RBP13.47□□□□□ -0.25
CERNA3-201ENST00000521403 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
CERNA3-201ENST00000521403 TMED6Q8WW62 240 aa13.47□□□□□ -0.25
CERNA3-201ENST00000521403 WFDC1Q9HC57 220 aa13.47□□□□□ -0.25
CERNA3-201ENST00000521403 TRAV9-2A0A087WT02 112 aa13.46□□□□□ -0.25
CERNA3-201ENST00000521403 FUSP35637 526 aaKnown RBP eCLIP13.46□□□□□ -0.25
CERNA3-201ENST00000521403 ERVFC1-1P60608 527 aa13.46□□□□□ -0.25
CERNA3-201ENST00000521403 GOLT1AQ6ZVE7 132 aa13.46□□□□□ -0.25
CERNA3-201ENST00000521403 IQCF2Q8IXL9 164 aa13.46□□□□□ -0.25
CERNA3-201ENST00000521403 LY96Q9Y6Y9 160 aa13.46□□□□□ -0.25
CERNA3-201ENST00000521403 F6UZH7 168 aa13.45□□□□□ -0.26
CERNA3-201ENST00000521403 HMGB3O15347 200 aaKnown RBP13.45□□□□□ -0.26
CERNA3-201ENST00000521403 RAB2AP61019 212 aa13.45□□□□□ -0.26
CERNA3-201ENST00000521403 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
CERNA3-201ENST00000521403 NFE4Q86UQ8 179 aa13.45□□□□□ -0.26
CERNA3-201ENST00000521403 WFDC10BQ8IUB3 73 aa13.45□□□□□ -0.26
CERNA3-201ENST00000521403 TRAV8-1A0A0A6YYK1 113 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 TRAV21A0A0B4J279 112 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 M0R2P5 195 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 GNRH2O43555 120 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 ORM1P02763 201 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 TDRG1Q3Y452 100 aa13.44□□□□□ -0.26
CERNA3-201ENST00000521403 OR4C5Q8NGB2 326 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms