RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PTPRSQ13332 1948 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 TRBV19A0A075B6N1 114 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 IGKV1OR2-108A0A075B7D4 117 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.68□□□□□ -1.98
CSMD3-209ENST00000519485 TRAV3A0A0B4J244 114 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 LOC107984156A0A0G2JMH3 177 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 TRBV7-9A0A0J9YWB2 115 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 LOC389332A0A1B0GUA5 103 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 RBAKDNA6NC62 111 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 CRLF1O75462 422 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV3-9P01782 118 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 LGALS1P09382 135 aaKnown RBP2.68□□□□□ -1.98
CSMD3-209ENST00000519485 ARMS2P0C7Q2 107 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 SAA1P0DJI8 122 aaPredicted RBP2.68□□□□□ -1.98
CSMD3-209ENST00000519485 CGB3P0DN86 165 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 CGB7P0DN87 165 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 VPREB1P12018 145 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 GP9P14770 177 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 RPL7P18124 248 aaKnown RBP2.68□□□□□ -1.98
CSMD3-209ENST00000519485 PSMB2P49721 201 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 FXYD2P54710 66 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 ATXN8Q156A1 80 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 C3AR1Q16581 482 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 MRPL51Q4U2R6 128 aaKnown RBP2.68□□□□□ -1.98
CSMD3-209ENST00000519485 CFAP126Q5VTH2 177 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 LYZL1Q6UWQ5 148 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 PATE2Q6UY27 113 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 SCGB1D4Q6XE38 83 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 Q6ZR03 302 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 ZNF833PQ6ZTB9 187 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 GOLT1AQ6ZVE7 132 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 WDR86Q86TI4 376 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 ARL17AQ8IVW1 177 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 C11orf53Q8IXP5 236 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 VKORC1L1Q8N0U8 176 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 SLC25A45Q8N413 288 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 LINC00311Q8N616 119 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 CD177Q8N6Q3 437 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 ITLN1Q8WWA0 313 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 COPS9Q8WXC6 57 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 SGK494Q96LW2 274 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 LINC01600Q96MT4 127 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 FOXC2Q99958 501 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 SHANK2-AS3Q9BTD1 123 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 RPP25Q9BUL9 199 aaKnown RBP2.68□□□□□ -1.98
CSMD3-209ENST00000519485 TPPP3Q9BW30 176 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 CNFNQ9BYD5 112 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 FBXL15Q9H469 300 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 TP73-AS1Q9UF72 201 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 HHLA3Q9XRX5 114 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 UFC1Q9Y3C8 167 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 PYGO1Q9Y3Y4 419 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 RP1P56715 2156 aa2.68□□□□□ -1.98
CSMD3-209ENST00000519485 PRRC2BQ5JSZ5 2229 aaKnown RBP2.67□□□□□ -1.98
CSMD3-209ENST00000519485 SPAG17Q6Q759 2223 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV4-4A0A075B6R2 117 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 A0A087WW49 117 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 A0A087X002 238 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 TRGV5A0A0B4J1U4 118 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 A0A0J9YWU9 116 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 FAM240AA0A1B0GVK7 77 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 TMEM213A2RRL7 107 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 F8VRH5 84 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 FSTL3O95633 263 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 IGKV3-15P01624 115 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV3-13P01766 116 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV4-59P01825 116 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 RPL27AP46776 148 aaKnown RBP2.67□□□□□ -1.98
CSMD3-209ENST00000519485 ZNF138P52744 262 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 NDUFV3P56181 108 aaKnown RBP2.67□□□□□ -1.98
CSMD3-209ENST00000519485 DSCR10P59022 87 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 GNG5P63218 68 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 SPINK14Q6IE38 97 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 C1orf122Q6ZSJ8 110 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 PCP2Q8IVA1 136 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 SBSPONQ8IVN8 264 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 ZNF843Q8N446 348 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 OR13C6PQ8NH95 151 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 C20orf78Q9BR46 151 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 MCRIP2Q9BUT9 160 aaKnown RBP2.67□□□□□ -1.98
CSMD3-209ENST00000519485 TTTY12Q9BZ98 90 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 ZNF71Q9NQZ8 489 aaPredicted RBP2.67□□□□□ -1.98
CSMD3-209ENST00000519485 ONECUT1Q9UBC0 465 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 PRO0461Q9UI25 63 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 ARHGAP21Q5T5U3 1957 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 TANC2Q9HCD6 1990 aa2.67□□□□□ -1.98
CSMD3-209ENST00000519485 TRBV7-3A0A075B6L6 115 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 IGKV1D-17A0A075B6S4 117 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 IGKV1D-37A0A075B6S9 117 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TRAV8-2A0A0B4J237 113 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TRAV8-4A0A0B4J246 113 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TRAV40A0A0B4J280 105 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV1-69DA0A0B4J2H0 117 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 WI2-2373I1.2A0A1W2PRP0 233 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 H7C423 109 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 ATP6V0E1O15342 81 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 NDUFB3O43676 98 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms