RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 FAM159AQ6UWV7 190 aa7.91□□□□□ -1.14
SMAD1-216ENST00000515527 CYP2G1PQ6ZSU1 146 aa7.91□□□□□ -1.14
SMAD1-216ENST00000515527 OR5H6Q8NGV6 325 aa7.91□□□□□ -1.14
SMAD1-216ENST00000515527 YIPF6Q96EC8 236 aa7.91□□□□□ -1.14
SMAD1-216ENST00000515527 MRPL53Q96EL3 112 aaKnown RBP7.91□□□□□ -1.14
SMAD1-216ENST00000515527 SAT2Q96F10 170 aaPredicted RBP7.91□□□□□ -1.14
SMAD1-216ENST00000515527 MGLLQ99685 303 aa7.91□□□□□ -1.14
SMAD1-216ENST00000515527 ARL6Q9H0F7 186 aa7.91□□□□□ -1.14
SMAD1-216ENST00000515527 M0R3E3 92 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 SULT1A3P0DMM9 295 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 SULT1A4P0DMN0 295 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 RPL13AP40429 203 aaKnown RBP7.9□□□□□ -1.14
SMAD1-216ENST00000515527 INPP1P49441 399 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 GNGT1P63211 74 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 MIAQ16674 131 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 TMEM78Q5T7P6 136 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 CFAP126Q5VTH2 177 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 C22orf42Q6IC83 251 aa7.9□□□□□ -1.14
SMAD1-216ENST00000515527 H3BQ15 152 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 CDS2O95674 445 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 LINC00694P0DN24 101 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 PLP1P60201 277 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
SMAD1-216ENST00000515527 PATE2Q6UY27 113 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 C8orf59Q8N0T1 100 aaPredicted RBP7.89□□□□□ -1.15
SMAD1-216ENST00000515527 MARCH1Q8TCQ1 289 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 ARV1Q9H2C2 271 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 HSPB7Q9UBY9 170 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 USH2AO75445 5202 aa7.89□□□□□ -1.15
SMAD1-216ENST00000515527 MT-ND6P03923 174 aa7.88□□□□□ -1.15
SMAD1-216ENST00000515527 HOXB5P09067 269 aa7.88□□□□□ -1.15
SMAD1-216ENST00000515527 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
SMAD1-216ENST00000515527 ZNF546Q86UE3 836 aa7.88□□□□□ -1.15
SMAD1-216ENST00000515527 SELENOHQ8IZQ5 122 aaKnown RBP7.88□□□□□ -1.15
SMAD1-216ENST00000515527 SMCO3A2RU48 225 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 B3GALNT1O75752 331 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 CIB2O75838 187 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 MT1HP80294 61 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 SURF2Q15527 256 aaPredicted RBP7.87□□□□□ -1.15
SMAD1-216ENST00000515527 C4orf46Q504U0 113 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 TMEM268Q5VZI3 342 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
SMAD1-216ENST00000515527 A0A096LNI7 61 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 GNRH2O43555 120 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 ZNF876PQ49A33 203 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 FAM162BQ5T6X4 162 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 KRTAP26-1Q6PEX3 210 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 CLPSL2Q6UWE3 100 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 C9orf85Q96MD7 179 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 SLC39A9Q9NUM3 307 aa7.86□□□□□ -1.15
SMAD1-216ENST00000515527 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 IGKV2-40A0A087WW87 121 aaPredicted RBP7.85□□□□□ -1.15
SMAD1-216ENST00000515527 IGKV2D-40P01614 121 aaPredicted RBP7.85□□□□□ -1.15
SMAD1-216ENST00000515527 GNAO1P09471 354 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 IAPPP10997 89 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 ZFP1Q6P2D0 407 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 GLYATL2Q8WU03 294 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 ATP5SQ99766 215 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 MLST8Q9BVC4 326 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 SAMD10Q9BYL1 202 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 DUSP21Q9H596 190 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 ZNF492Q9P255 531 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 Q9UF83 564 aa7.85□□□□□ -1.15
SMAD1-216ENST00000515527 TRDV1A0A1B0GX56 115 aa7.84□□□□□ -1.15
SMAD1-216ENST00000515527 H0Y9J4 135 aa7.84□□□□□ -1.15
SMAD1-216ENST00000515527 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.15
SMAD1-216ENST00000515527 FGF8P55075 233 aaPredicted RBP7.84□□□□□ -1.15
SMAD1-216ENST00000515527 SELENOTP62341 195 aa7.84□□□□□ -1.15
SMAD1-216ENST00000515527 MPV17L2Q567V2 206 aa7.84□□□□□ -1.15
SMAD1-216ENST00000515527 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
SMAD1-216ENST00000515527 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
SMAD1-216ENST00000515527 A0A087WWL8 130 aa7.83□□□□□ -1.16
SMAD1-216ENST00000515527 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
SMAD1-216ENST00000515527 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
SMAD1-216ENST00000515527 OR2T35Q8NGX2 323 aa7.83□□□□□ -1.16
SMAD1-216ENST00000515527 ZFAND1Q8TCF1 268 aa7.83□□□□□ -1.16
SMAD1-216ENST00000515527 PRSS46E5RG02 174 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 AKR1C4P17516 323 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 PRSS3P35030 304 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 ZNF266Q14584 549 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 SMCO1Q147U7 214 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 CROCCP3Q8IVE0 287 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 PRELID1Q9Y255 219 aa7.82□□□□□ -1.16
SMAD1-216ENST00000515527 MACF1Q9UPN3 7388 aaKnown RBP7.81□□□□□ -1.16
SMAD1-216ENST00000515527 CTDSPLO15194 276 aa7.81□□□□□ -1.16
SMAD1-216ENST00000515527 SRPXP78539 464 aa7.81□□□□□ -1.16
SMAD1-216ENST00000515527 OR13C8Q8NGS7 320 aa7.81□□□□□ -1.16
SMAD1-216ENST00000515527 GPX8Q8TED1 209 aa7.81□□□□□ -1.16
SMAD1-216ENST00000515527 SCN3BQ9NY72 215 aa7.81□□□□□ -1.16
SMAD1-216ENST00000515527 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
SMAD1-216ENST00000515527 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
SMAD1-216ENST00000515527 Q6AWC8 147 aa7.8□□□□□ -1.16
SMAD1-216ENST00000515527 OR2G3Q8NGZ4 309 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms