RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BBIP1A8MTZ0 92 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 H3BMG7 143 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 SULT1C4O75897 302 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 RPS3P23396 243 aaKnown RBP eCLIP0.62□□□□□ -2.312e-15■■□□□ 14.1
HMGCS1-207ENST00000514610 ZNF137PP52743 207 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 QRFPP83859 136 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 TFAMQ00059 246 aaKnown RBP0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 CSAG1Q6PB30 78 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 CCDC115Q96NT0 180 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 CACNA1EQ15878 2313 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 DSPPQ9NZW4 1301 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 EDF1O60869 148 aaKnown RBP0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 S100GP29377 79 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 SNRPD3P62318 126 aaKnown RBP0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 TMEM128Q5BJH2 165 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 IZUMO2Q6UXV1 221 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 C3orf62Q6ZUJ4 267 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 C10orf111Q8N326 155 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 ABCA1O95477 2261 aa0.61□□□□□ -2.31
HMGCS1-207ENST00000514610 RREB1Q92766 1687 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 A0A1W2PPB8 328 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 A0A1W2PRS3 328 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 KIR3DP1A8MWS1 328 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 CDC42EP2O14613 210 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 SLC25A4P12235 298 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 CCL4P13236 92 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 TOMM20LQ6UXN7 152 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 Q6ZS92 163 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 TCTEX1D1Q8N7M0 179 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
HMGCS1-207ENST00000514610 IGHV3-30P01768 117 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 IGHV3-30-5P0DP03 117 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 KDELR1P24390 212 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 SRP9P49458 86 aaKnown RBP0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 BLCAPP62952 87 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 ATOH7Q8N100 152 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 OR9Q1Q8NGQ5 310 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 DDA1Q9BW61 102 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 NDUFAF1Q9Y375 327 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 MPC1Q9Y5U8 109 aa0.59□□□□□ -2.31
HMGCS1-207ENST00000514610 WDR97A6NE52 1622 aa0.59□□□□□ -2.32
HMGCS1-207ENST00000514610 KIDINS220Q9ULH0 1771 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 DLEC1Q9Y238 1755 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 LRP5O75197 1615 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 PRORSD1PA6NEY8 169 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 H0YJX3 145 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 GTF2A1P52655 376 aaPredicted RBP0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 CAV3P56539 151 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 TMEM229BQ8NBD8 167 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 PLXNA2O75051 1894 aa0.58□□□□□ -2.32
HMGCS1-207ENST00000514610 CDK12Q9NYV4 1490 aaPredicted RBP0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 LY6G6CO95867 125 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 HBDP02042 147 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 DNAJB13P59910 316 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 XAF1Q6GPH4 301 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 OR8J3Q8NGG0 315 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 OR5A2Q8NGI9 324 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 NAT14Q8WUY8 206 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 COMMD3Q9UBI1 195 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 RBBP6Q7Z6E9 1792 aaKnown RBP0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 SPAG17Q6Q759 2223 aa0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 VIRMAQ69YN4 1812 aaKnown RBP0.57□□□□□ -2.32
HMGCS1-207ENST00000514610 MEGF8Q7Z7M0 2845 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 TSTD3H0UI37 97 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 IGKCP01834 107 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 GYPBP06028 91 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 IL7P13232 177 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 RPL22P35268 128 aaKnown RBP0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 ETV6P41212 452 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 FXYD6P3P58550 94 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 IQCJQ1A5X6 159 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 OTOSQ8NHW6 89 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 SMIM7Q9BQ49 75 aa0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 MAP2P11137 1827 aaKnown RBP0.56□□□□□ -2.32
HMGCS1-207ENST00000514610 OVOS2A0A0G2JMS6 1433 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 KCPQ6ZWJ8 1503 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 LOC101927531A0A1B0GV80 90 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 TMEM30CPA0ZSE6 113 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 A6NN06 94 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 IFITM5A6NNB3 132 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 J3KT08 172 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 PRH1P02810 166 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 EVI2AP22794 236 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 FXYD3Q14802 87 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 GLYATL3Q5SZD4 288 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 SKA2Q8WVK7 121 aaPredicted RBP0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 FAM103A1Q9BTL3 118 aaKnown RBP0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 MRPL40Q9NQ50 206 aaKnown RBP0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 MRPL36Q9P0J6 103 aaKnown RBP0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 MED23Q9ULK4 1368 aa0.55□□□□□ -2.32
HMGCS1-207ENST00000514610 MYH13Q9UKX3 1938 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 NBDYA0A0U1RRE5 68 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 GNG14A0A1W2PPG7 69 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 TMEM189A5PLL7 270 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms