RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 IMPG1Q17R60 797 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 Q5XG85 94 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 XAF1Q6GPH4 301 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 CLDN22Q8N7P3 220 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 LINC00208Q96KT6 92 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 TRIM4Q9C037 500 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 ENY2Q9NPA8 101 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 NKIRAS1Q9NYS0 192 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 MIA2Q96PC5 1412 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 DOCK4Q8N1I0 1966 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 LAMC3Q9Y6N6 1575 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 SNAPC4Q5SXM2 1469 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 A0A087WUJ7 227 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 A6NN06 94 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 MT1AP04731 61 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 SERPINA6P08185 405 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 EVI2AP22794 236 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 DYNLT3P51808 116 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 TPM4P67936 248 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 H3F3AP84243 136 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 COX6A2Q02221 97 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 NEDD8Q15843 81 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 IAH1Q2TAA2 248 aaPredicted RBP-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 KLK9Q2XQG4 91 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 VMA21Q3ZAQ7 101 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 FOXI2Q6ZQN5 318 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 IFT20Q8IY31 132 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 MT1MQ8N339 61 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 ZHX1-C8orf76Q96EF9 292 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 ARL5BQ96KC2 179 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 PARD6GQ9BYG4 376 aaPredicted RBP-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 RNF122Q9H9V4 155 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 NAT8BQ9UHF3 227 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 PRELID3BQ9Y3B1 194 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 ATP6V1DQ9Y5K8 247 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 SYNJ1O43426 1573 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 KIAA0100Q14667 2235 aaKnown RBP-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 RTL1A6NKG5 1358 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 KNL1Q8NG31 2342 aa-0.33□□□□□ -2.46
PDGFC-208ENST00000512711 KIF1BO60333 1816 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 NUP98P52948 1817 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 NINQ8N4C6 2090 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 A0A0J9YY99 117 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 H0YAA0 97 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 M0R036 132 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 RER1O15258 196 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 LYRM1O43325 122 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 GGCTO75223 188 aaKnown RBP-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 CFDP00746 253 aaPredicted RBP-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 IGHV3-33P01772 117 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 MT2AP02795 61 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 MT1FP04733 61 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 OMPP47874 163 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 ATP5G3P48201 142 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 TMBIM6P55061 237 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 MYL6P60660 151 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 SNRPD3P62318 126 aaKnown RBP-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 KLRD1Q13241 179 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 DIAPH2-AS1Q14236 149 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 GOLT1AQ6ZVE7 132 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 SMG6Q86US8 1419 aaKnown RBP-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 TRAPPC5Q8IUR0 188 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 OTUD6BQ8N6M0 293 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 CACYBPQ9HB71 228 aaKnown RBP-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 TANC2Q9HCD6 1990 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 ASXL1Q8IXJ9 1541 aa-0.34□□□□□ -2.46
PDGFC-208ENST00000512711 CEP164Q9UPV0 1460 aa-0.35□□□□□ -2.46
PDGFC-208ENST00000512711 DSPPQ9NZW4 1301 aa-0.35□□□□□ -2.46
PDGFC-208ENST00000512711 TRBV19A0A075B6N1 114 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 TRAV4A0A0B4J268 109 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 LOC101927531A0A1B0GV80 90 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 FAM25EA8MYX2 175 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 K7ERJ3 54 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 HMGB3O15347 200 aaKnown RBP-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 BANF1O75531 89 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 LYPLA2O95372 231 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 IFNA7P01567 189 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 CXCL1P09341 107 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 IDO1P14902 403 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 NFYBP25208 207 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 ETV6P41212 452 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 ARPP19P56211 112 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 MAGOHP61326 146 aaKnown RBP-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 MT1HP80294 61 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 MT1XP80297 61 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 FXYD3Q14802 87 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 SPCS2Q15005 226 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 IDO2Q6ZQW0 420 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 ZCCHC23Q6ZST2 131 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 PPTC7Q8NI37 304 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 GRPEL2Q8TAA5 225 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 GNPDA2Q8TDQ7 276 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 DDI1Q8WTU0 396 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 TEX37Q96LM6 180 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 CCDC42Q96M95 316 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 AP1S3Q96PC3 154 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 LLPHQ9BRT6 129 aaKnown RBP-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 IMUPQ9GZP8 106 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 MAP1LC3BQ9GZQ8 125 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms