RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 SNAI2O43623 268 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 FCER1GP30273 86 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 CACNG7P62955 275 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 UBE2V1Q13404 147 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 C16orf92Q96LL3 132 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 LINC00477Q96M19 166 aa7.06□□□□□ -1.28
CPNE4-210ENST00000512332 TRAV40A0A0B4J280 105 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV7-4-1A0A0J9YVY3 117 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 A6NDX4 124 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 ZNF207O43670 478 aaKnown RBP7.05□□□□□ -1.28
CPNE4-210ENST00000512332 SMIM15Q7Z3B0 74 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV3-49A0A0A0MS15 119 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 OVOL1O14753 267 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 SIVA1O15304 175 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 FGF6P10767 208 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 BRD3OSQ6XYD6 125 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 BOD1L2Q8IYS8 172 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 Q8N8P6 123 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 CCL19Q99731 98 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 ZNF580Q9UK33 172 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 NCOR2Q9Y618 2525 aa7.05□□□□□ -1.28
CPNE4-210ENST00000512332 IGLV2-18A0A075B6J9 118 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 TRBV7-9A0A0J9YWB2 115 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 SOCS3O14543 225 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 CD5LO43866 347 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 CLEC2AQ6UVW9 174 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 C2orf91Q6ZV80 131 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 TP73-AS1Q9UF72 201 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV3OR16-10A0A075B7F0 116 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 TAX1BP3O14907 124 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 CCL25O15444 150 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 PTTG1IPP53801 180 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 GPHB5Q86YW7 130 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 OR2K2Q8NGT1 345 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 LINC00527Q9UJ94 153 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 AKAP6Q13023 2319 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 ABCA2Q9BZC7 2435 aa7.04□□□□□ -1.28
CPNE4-210ENST00000512332 A0A0G2JLM5 398 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 SMAD7O15105 426 aaKnown RBP7.03□□□□□ -1.28
CPNE4-210ENST00000512332 GAS8-AS1O95177 125 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 IGLV1-40P01703 118 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 IGHV4-38-2P0DP08 117 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 EVI2AP22794 236 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 LEPP41159 167 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 SEC11AP67812 179 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 UNQ9165/PRO28630Q6UXU0 137 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 C20orf173Q96LM9 149 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 SMPXQ9UHP9 88 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 CHD8Q9HCK8 2581 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 MSMBP08118 114 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 FOXE3Q13461 319 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 ZFAND2AQ8N6M9 145 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 NRACQ8N912 160 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 MRAP2Q96G30 205 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
CPNE4-210ENST00000512332 CSMD1Q96PZ7 3565 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 H3BUX3 64 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 TRBV12-3P01733 135 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 MED14OSP0DP75 135 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 GATA3P23771 443 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 ATP5J2P56134 94 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 FXYD7P58549 80 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 TMEM97Q5BJF2 176 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 Q6ZVH6 145 aa7.02□□□□□ -1.29
CPNE4-210ENST00000512332 ASH1LQ9NR48 2969 aaKnown RBP7.02□□□□□ -1.29
CPNE4-210ENST00000512332 K7EMT4 169 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 ATP5LO75964 103 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 DSCR9P59020 149 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 CFHR3Q02985 330 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 KIR3DS1Q14943 382 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 ODF1Q14990 250 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 SPANXN1Q5VSR9 72 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 IGHV4-30-2A0A087WSY4 118 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 B4DSR2 109 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 GATA1P15976 413 aaPredicted RBP7.01□□□□□ -1.29
CPNE4-210ENST00000512332 LAGE3Q14657 143 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 PRR9Q5T870 116 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 SAMD13Q5VXD3 122 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 OR4X2Q8NGF9 303 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 KLK15Q9H2R5 256 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 HHLA3Q9XRX5 114 aa7.01□□□□□ -1.29
CPNE4-210ENST00000512332 A1L4Q6 167 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 K7EMI3 77 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 PF4V1P10720 104 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 BLCAPP62952 87 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 SRSF1Q07955 248 aaKnown RBP eCLIP7□□□□□ -1.29
CPNE4-210ENST00000512332 LY6EQ16553 131 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 TMEM158Q8WZ71 300 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 SPOCK3Q9BQ16 436 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 DKK2Q9UBU2 259 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 ITPR1Q14643 2758 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 TMEM8BA6NDV4 472 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 K7EP13 123 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms