RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 A0A1W2PRE2 83 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 H3BMM0 161 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 HBE1P02100 147 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 CT45A10P0DMU9 189 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 BCL2P10415 239 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 CNN1P51911 297 aaKnown RBP3.73□□□□□ -1.81
MSH3-202ENST00000512258 AMTNQ6UX39 209 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 FOXI2Q6ZQN5 318 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 Q6ZQT7 251 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 GOLT1AQ6ZVE7 132 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 TRPT1Q86TN4 253 aaKnown RBP3.73□□□□□ -1.81
MSH3-202ENST00000512258 LYPD1Q8N2G4 141 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 OR4B1Q8NGF8 309 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 OR8A1Q8NGG7 326 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 Q8TAT8 98 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 AGPAT4-IT1Q9H0P7 198 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 SLC35B3Q9H1N7 401 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 SAV1Q9H4B6 383 aaPredicted RBP3.73□□□□□ -1.81
MSH3-202ENST00000512258 AAMDCQ9H7C9 122 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 EPDR1Q9UM22 224 aa3.73□□□□□ -1.81
MSH3-202ENST00000512258 RBFOX3A6NFN3 312 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 C11orf94C9JXX5 98 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 J3KRW8 73 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 M0R2Z0 102 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 PEX7O00628 323 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 IGLV2-11P01706 119 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 TCRAP04437 139 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 GIG44P09565 113 aaPredicted RBP3.72□□□□□ -1.81
MSH3-202ENST00000512258 FRMD6-AS1P0C7T7 363 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 HLA-DRB4P13762 266 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 MALP21145 153 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 DEFA6Q01524 100 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 PMS2P11Q13670 270 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 ZNF506Q5JVG8 444 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 CLLU1Q5K131 121 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 PRR9Q5T870 116 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 EBLN2Q6P2I7 272 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 LINC00322Q6ZN03 302 aaPredicted RBP3.72□□□□□ -1.81
MSH3-202ENST00000512258 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 C5orf17Q8NAS9 161 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 CMTM2Q8TAZ6 248 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 MRPL53Q96EL3 112 aaKnown RBP3.72□□□□□ -1.81
MSH3-202ENST00000512258 TVP23CQ96ET8 276 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 FAM210AQ96ND0 272 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 FAM110AQ9BQ89 295 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 DERL1Q9BUN8 251 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 MANBALQ9NQG1 85 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 CLEC5AQ9NY25 188 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 PRELID1Q9Y255 219 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 HLA-DRB4X5D2U9 266 aa3.72□□□□□ -1.81
MSH3-202ENST00000512258 TRAV12-2A0A075B6T6 113 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 RAB19A4D1S5 217 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 PGPEP1LA6NFU8 196 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 A8MTW9 85 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 PRM2P04554 102 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 SRP19P09132 144 aaKnown RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 RBMY1A1P0DJD3 496 aaKnown RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 RBMY1CP0DJD4 496 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 CSN1S1P47710 185 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 PPT1P50897 306 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 CEBPGP53567 150 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 CMC4P56277 68 aaPredicted RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 RAB14P61106 215 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 MEF2BQ02080 365 aaPredicted RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 RBMY1FQ15415 496 aaKnown RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 SPINK13Q1W4C9 94 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 DEFB121Q5J5C9 76 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 SAMD13Q5VXD3 122 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 PRNTQ86SH4 94 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 STHQ8IWL8 128 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 CYB561D1Q8N8Q1 229 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 NHLRC2Q8NBF2 726 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 OR10J6PQ8NGY7 276 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 MRAPQ8TCY5 172 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 C2CD4CQ8TF44 421 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 FAM19A4Q96LR4 140 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 ATG101Q9BSB4 218 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 EIF5A2Q9GZV4 153 aaKnown RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 TUBA4BQ9H853 241 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 RETNQ9HD89 108 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 ZMAT5Q9UDW3 170 aaKnown RBP3.71□□□□□ -1.82
MSH3-202ENST00000512258 VAX2Q9UIW0 290 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 PSG8Q9UQ74 426 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 ARL2-SNX15V9GYD0 113 aa3.71□□□□□ -1.82
MSH3-202ENST00000512258 TRBV20OR9-2A0A075B6H5 130 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 LOC102724200A0A096LPH7 203 aaPredicted RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 A8MZ25 164 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 F6UZH7 168 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 CRXO43186 299 aaPredicted RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 DUSP14O95147 198 aaKnown RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 CA1P00915 261 aaPredicted RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 IFNA1P01562 189 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 AKR1C3P42330 323 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 RPL35P42766 123 aaKnown RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 ZNF80P51504 273 aaPredicted RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 ZNF138P52744 262 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 FLI1Q01543 452 aaPredicted RBP3.7□□□□□ -1.82
MSH3-202ENST00000512258 BTN1A1Q13410 526 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 ZNF674Q2M3X9 581 aa3.7□□□□□ -1.82
MSH3-202ENST00000512258 Q86TA4 180 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms