RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 FAM74A3Q4VXF1 159 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 IBA57Q5T440 356 aaKnown RBP5.94□□□□□ -1.46
SMAD1-209ENST00000511125 NUDT10Q8NFP7 164 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 NUDT11Q96G61 164 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 TXNDC17Q9BRA2 123 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 TP53TG3Q9ULZ0 132 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 DEFB4AO15263 64 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 GNRH2O43555 120 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 SH2D1AO60880 128 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 OR2D3Q8NGH3 330 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 C11orf21Q9P2W6 132 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 PRELID1Q9Y255 219 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 S100A1P23297 94 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 SMUG1Q53HV7 270 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 FOXI2Q6ZQN5 318 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 SFRP2Q96HF1 295 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 SIGLEC8Q9NYZ4 499 aa5.94□□□□□ -1.46
SMAD1-209ENST00000511125 FRMD6-AS1P0C7T7 363 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 TAS2R60P59551 318 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 GFI1BQ5VTD9 330 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 OR10G8Q8NGN5 311 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 MCRIP2Q9BUT9 160 aaKnown RBP5.93□□□□□ -1.46
SMAD1-209ENST00000511125 SMDT1Q9H4I9 107 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 C19orf73Q9NVV2 129 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 KLF12Q9Y4X4 402 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 TRAV25A0A0B4J276 109 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 P01737 135 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 C9orf47Q6ZRZ4 202 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 TMEM183AQ8IXX5 376 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 ZFAND2AQ8N6M9 145 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 LINC00477Q96M19 166 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 H7BYZ3 331 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 GATCO43716 136 aaKnown RBP5.93□□□□□ -1.46
SMAD1-209ENST00000511125 SNAPINO95295 136 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 RBMY1A1P0DJD3 496 aaKnown RBP5.93□□□□□ -1.46
SMAD1-209ENST00000511125 RBMY1CP0DJD4 496 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 HLA-DRB4P13762 266 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 INSL3P51460 131 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 RBMY1FQ15415 496 aaKnown RBP5.93□□□□□ -1.46
SMAD1-209ENST00000511125 LINC01587Q99440 93 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 CARHSP1Q9Y2V2 147 aaKnown RBP5.93□□□□□ -1.46
SMAD1-209ENST00000511125 HLA-DRB4X5D2U9 266 aa5.93□□□□□ -1.46
SMAD1-209ENST00000511125 A0A1W2PPQ1 181 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 NPIPB6E9PJ23 425 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 IGHV4-30-4P0DP06 118 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 DEFB135Q30KP9 77 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 Q8N1Y9 231 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 PGLYRP4Q96LB8 373 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 MLST8Q9BVC4 326 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 CDKN1BP46527 198 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 RIPPLY3P57055 190 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 ANXA2RQ3ZCQ2 193 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 SAPCD1Q5SSQ6 148 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 MRPL54Q6P161 138 aaKnown RBP5.92□□□□□ -1.46
SMAD1-209ENST00000511125 FAM110AQ9BQ89 295 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 RETNQ9HD89 108 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 ZFP30Q9Y2G7 519 aa5.92□□□□□ -1.46
SMAD1-209ENST00000511125 FAM162BQ5T6X4 162 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 TMEM189A5PLL7 270 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 B4DEV8 164 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 C9JCJ5 164 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 MT-ND4LP03901 98 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 C10orf91Q5T1B1 145 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 AMTNQ6UX39 209 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 C15orf54Q8N8G6 183 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 TGIF2-C20orf24A0A0A6YYL0 155 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 IGKV3D-20A0A0C4DH25 116 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 FABP5P3A8MUU1 101 aa5.91□□□□□ -1.46
SMAD1-209ENST00000511125 DUSP14O95147 198 aaKnown RBP5.91□□□□□ -1.46
SMAD1-209ENST00000511125 S100A4P26447 101 aaKnown RBP5.91□□□□□ -1.46
SMAD1-209ENST00000511125 MRPL53Q96EL3 112 aaKnown RBP5.91□□□□□ -1.46
SMAD1-209ENST00000511125 CBY3A6NI87 242 aa5.9□□□□□ -1.46
SMAD1-209ENST00000511125 H3BVH4 76 aa5.9□□□□□ -1.46
SMAD1-209ENST00000511125 CRXO43186 299 aaPredicted RBP5.9□□□□□ -1.46
SMAD1-209ENST00000511125 AZU1P20160 251 aa5.9□□□□□ -1.46
SMAD1-209ENST00000511125 CAMPP49913 170 aa5.9□□□□□ -1.46
SMAD1-209ENST00000511125 MDFICQ9P1T7 246 aa5.9□□□□□ -1.46
SMAD1-209ENST00000511125 PFN1P07737 140 aaKnown RBP5.9□□□□□ -1.47
SMAD1-209ENST00000511125 RAB4BP61018 213 aa5.9□□□□□ -1.47
SMAD1-209ENST00000511125 FAM159AQ6UWV7 190 aa5.9□□□□□ -1.47
SMAD1-209ENST00000511125 TRPT1Q86TN4 253 aaKnown RBP5.9□□□□□ -1.47
SMAD1-209ENST00000511125 V9GYV3 84 aa5.9□□□□□ -1.47
SMAD1-209ENST00000511125 C7orf71A4D174 169 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 RBAKDNA6NC62 111 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 FOXA3P55318 350 aaPredicted RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 NEU1Q99519 415 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 TENM3Q9P273 2699 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 M0R381 172 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 S100A9P06702 114 aaKnown RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 SAMD13Q5VXD3 122 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 DEFB104AQ8WTQ1 72 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 SERTM2A0A1B0GWG4 89 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 HIGD1CA8MV81 97 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 GIG44P09565 113 aaPredicted RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 NUTF2P61970 127 aaKnown RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 PNRC1Q12796 327 aaPredicted RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 GTSF1Q8WW33 167 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms