RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PHYHIPLQ96FC7 376 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 RGS13O14921 159 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 NMBP08949 121 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 NBEAP1P0C6P0 100 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 S100A11P31949 105 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 C12orf45Q8N5I9 185 aaPredicted RBP10.7□□□□□ -0.7
RAB40C-202ENST00000509637 NPCDR1Q9BY65 106 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 PTTG2Q9NZH5 202 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
RAB40C-202ENST00000509637 LRCOL1A6NCL2 159 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 LYRM1O43325 122 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 EIF3GO75821 320 aaKnown RBP eCLIP10.69□□□□□ -0.7
RAB40C-202ENST00000509637 OR10J4P0C629 311 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 ZNF846Q147U1 533 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 IQCF2Q8IXL9 164 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 THAP6Q8TBB0 222 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
RAB40C-202ENST00000509637 H0YIZ8 118 aa10.68□□□□□ -0.7
RAB40C-202ENST00000509637 GYPEP15421 78 aa10.68□□□□□ -0.7
RAB40C-202ENST00000509637 ZNF138P52744 262 aa10.68□□□□□ -0.7
RAB40C-202ENST00000509637 S100A10P60903 97 aa10.68□□□□□ -0.7
RAB40C-202ENST00000509637 NUDT15Q9NV35 164 aa10.68□□□□□ -0.7
RAB40C-202ENST00000509637 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
RAB40C-202ENST00000509637 SRRM2Q9UQ35 2752 aaKnown RBP10.67□□□□□ -0.7
RAB40C-202ENST00000509637 CENPXA8MT69 81 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 GCSHP23434 173 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 ZNF266Q14584 549 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 OR10G4Q8NGN3 311 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 RASL10AQ92737 203 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 OR51M1Q9H341 326 aa10.67□□□□□ -0.7
RAB40C-202ENST00000509637 GPN1Q9HCN4 374 aaPredicted RBP10.67□□□□□ -0.7
RAB40C-202ENST00000509637 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 EREGO14944 169 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 GNRH2O43555 120 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 SIX6O95475 246 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 ATP6V1FQ16864 119 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 S100ZQ8WXG8 99 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 FRZBQ92765 325 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 AAMDCQ9H7C9 122 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 OR5AC2Q9NZP5 309 aa10.66□□□□□ -0.7
RAB40C-202ENST00000509637 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 SLAQ13239 276 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 TMEM183BQ1AE95 376 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 Q6AWC8 147 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 TMEM183AQ8IXX5 376 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 TVP23CQ96ET8 276 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 PAXXQ9BUH6 204 aa10.65□□□□□ -0.7
RAB40C-202ENST00000509637 H2AFB2P0C5Z0 115 aa10.64□□□□□ -0.71
RAB40C-202ENST00000509637 RANP62826 216 aaKnown RBP10.64□□□□□ -0.71
RAB40C-202ENST00000509637 OR5C1Q8NGR4 320 aa10.64□□□□□ -0.71
RAB40C-202ENST00000509637 IGHV3-16A0A0C4DH30 117 aa10.63□□□□□ -0.71
RAB40C-202ENST00000509637 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
RAB40C-202ENST00000509637 IFNA5P01569 189 aa10.63□□□□□ -0.71
RAB40C-202ENST00000509637 PVALBP20472 110 aaPredicted RBP10.63□□□□□ -0.71
RAB40C-202ENST00000509637 SRIP30626 198 aa10.63□□□□□ -0.71
RAB40C-202ENST00000509637 WFDC2Q14508 124 aa10.63□□□□□ -0.71
RAB40C-202ENST00000509637 CCDC32Q9BV29 185 aa10.63□□□□□ -0.71
RAB40C-202ENST00000509637 WDR61Q9GZS3 305 aaKnown RBP10.63□□□□□ -0.71
RAB40C-202ENST00000509637 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
RAB40C-202ENST00000509637 CRYGDP07320 174 aa10.62□□□□□ -0.71
RAB40C-202ENST00000509637 HBG1P69891 147 aa10.62□□□□□ -0.71
RAB40C-202ENST00000509637 HBG2P69892 147 aa10.62□□□□□ -0.71
RAB40C-202ENST00000509637 STX12Q86Y82 276 aa10.62□□□□□ -0.71
RAB40C-202ENST00000509637 TRAV9-2A0A087WT02 112 aa10.61□□□□□ -0.71
RAB40C-202ENST00000509637 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
RAB40C-202ENST00000509637 EVI2AP22794 236 aa10.61□□□□□ -0.71
RAB40C-202ENST00000509637 DPPA3Q6W0C5 159 aa10.61□□□□□ -0.71
RAB40C-202ENST00000509637 Q8N3U1 123 aa10.61□□□□□ -0.71
RAB40C-202ENST00000509637 SLC25A31Q9H0C2 315 aa10.61□□□□□ -0.71
RAB40C-202ENST00000509637 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
RAB40C-202ENST00000509637 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
RAB40C-202ENST00000509637 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
RAB40C-202ENST00000509637 SPXQ9BT56 116 aa10.6□□□□□ -0.71
RAB40C-202ENST00000509637 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
RAB40C-202ENST00000509637 IGLV5-52A0A0A0MRZ9 124 aa10.59□□□□□ -0.71
RAB40C-202ENST00000509637 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
RAB40C-202ENST00000509637 TYMSP04818 313 aa10.59□□□□□ -0.71
RAB40C-202ENST00000509637 TRAV8-1A0A0A6YYK1 113 aa10.58□□□□□ -0.72
RAB40C-202ENST00000509637 OR7C2O60412 319 aa10.58□□□□□ -0.72
RAB40C-202ENST00000509637 ORM1P02763 201 aa10.58□□□□□ -0.72
RAB40C-202ENST00000509637 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
RAB40C-202ENST00000509637 NAGKQ9UJ70 344 aa10.58□□□□□ -0.72
RAB40C-202ENST00000509637 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 F6UZH7 168 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 K7EP13 123 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 M0R2P5 195 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 TIRAPP58753 221 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 LINC01556Q5JQF7 62 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 Q8N814 137 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 OR4C5Q8NGB2 326 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 HYLS1Q96M11 299 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 WFDC1Q9HC57 220 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 Q9UF83 564 aa10.57□□□□□ -0.72
RAB40C-202ENST00000509637 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms