RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 THSD7BQ9C0I4 1608 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 BPTFQ12830 3046 aa3.33□□□□□ -1.88
NIPBL-206ENST00000509429 CASP8AP2Q9UKL3 1982 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 TRBV5-4A0A0C4DH59 114 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 IGKV1-8A0A0C4DH67 115 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 BUB1B-PAK6H3BSN5 160 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 CCL16O15467 120 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 IGKV1-5P01602 117 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 PIRTP0C851 137 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 DYNLT3P51808 116 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
NIPBL-206ENST00000509429 SMIM11AP58511 58 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 SNRPGP62308 76 aaKnown RBP3.32□□□□□ -1.88
NIPBL-206ENST00000509429 CCL20P78556 96 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 RBMY1FQ15415 496 aaKnown RBP3.32□□□□□ -1.88
NIPBL-206ENST00000509429 SS18Q15532 418 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 RPL7L1Q6DKI1 246 aaKnown RBP3.32□□□□□ -1.88
NIPBL-206ENST00000509429 NOXRED1Q6NXP6 359 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 MARCH3Q86UD3 253 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 MDP1Q86V88 176 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 ODF3L1Q8IXM7 274 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 NKAPP1Q8N9T2 125 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 VSIG2Q96IQ7 327 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 TRGV9Q99603 122 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 Q9H3A6 140 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 C6orf106Q9H6K1 298 aaPredicted RBP3.32□□□□□ -1.88
NIPBL-206ENST00000509429 NXT2Q9NPJ8 142 aaKnown RBP3.32□□□□□ -1.88
NIPBL-206ENST00000509429 PLXNA2O75051 1894 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 ATG2BQ96BY7 2078 aa3.32□□□□□ -1.88
NIPBL-206ENST00000509429 SNRNP200O75643 2136 aaKnown RBP3.31□□□□□ -1.88
NIPBL-206ENST00000509429 HCFC1P51610 2035 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 TICRRQ7Z2Z1 1910 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 KMT2EQ8IZD2 1858 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 IGKV1-27A0A075B6S5 117 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 A0A1W2PS18 150 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 K7ERJ3 54 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 TIMM17BO60830 172 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 HLA-DPB1P04440 258 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 SYNJ2BPP57105 145 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 BRWD1-AS2P59051 145 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 UBE2BP63146 152 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 RPS21P63220 83 aaKnown RBP3.31□□□□□ -1.88
NIPBL-206ENST00000509429 Q8N8P6 123 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 SLC25A29Q8N8R3 303 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 SMIM4Q8WVI0 70 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 DIRC1Q969H9 104 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF702PQ9H963 129 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 HIGD1BQ9P298 99 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 EPDR1Q9UM22 224 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 TRIP12Q14669 1992 aaPredicted RBP3.31□□□□□ -1.88
NIPBL-206ENST00000509429 PLXNB3Q9ULL4 1909 aa3.31□□□□□ -1.88
NIPBL-206ENST00000509429 IGLV3-16A0A075B6K0 115 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-206ENST00000509429 IGLV9-49A0A0B4J1Y8 123 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF736B4DX44 427 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-206ENST00000509429 LOC730098B7Z3J9 87 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 COX7A2P2O60397 106 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 APCSP02743 223 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 ACYP1P07311 99 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 DSCR4P56555 118 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF816Q0VGE8 651 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-206ENST00000509429 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 C1orf100Q5SVJ3 147 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 C12orf73Q69YU5 71 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 GFRALQ6UXV0 394 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 C7orf65Q6ZTY9 151 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 WFDC5Q8TCV5 224 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 PPP1R1CQ8WVI7 109 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 TMEM243Q9BU79 118 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 NMES1Q9C002 83 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-206ENST00000509429 SLC25A15Q9Y619 301 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 LY96Q9Y6Y9 160 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 ARL2-SNX15V9GYD0 113 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 LRRK1Q38SD2 2015 aa3.3□□□□□ -1.88
NIPBL-206ENST00000509429 OBSL1O75147 1896 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 KIAA1549LQ6ZVL6 1849 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 IGKV1-9A0A0C4DH69 117 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 TMEM272A0A1B0GTI8 110 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 IBA57-AS1B1ANH7 110 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 C9JCJ5 164 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 CPSF4O95639 269 aaKnown RBP3.29□□□□□ -1.88
NIPBL-206ENST00000509429 LTAP01374 205 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 PRM2P04554 102 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 CCKP06307 115 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 S100A4P26447 101 aaKnown RBP3.29□□□□□ -1.88
NIPBL-206ENST00000509429 CD52P31358 61 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 EFNA4P52798 201 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 PCBD1P61457 104 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 HERVK_113P61574 105 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 BLCAPP62952 87 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 RPL36AP83881 106 aaKnown RBP3.29□□□□□ -1.88
NIPBL-206ENST00000509429 INSL4Q14641 139 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF791Q3KP31 576 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-206ENST00000509429 ZFP2Q6ZN57 461 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 C17orf82Q86X59 251 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-206ENST00000509429 ZNF584Q8IVC4 421 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 FAM103A1Q9BTL3 118 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms