RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 COMMD3Q9UBI1 195 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 METTL1Q9UBP6 276 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 ZFP30Q9Y2G7 519 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 HLA-DRB4X5D2U9 266 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 DISP2A7MBM2 1401 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 LOC110117498A0A087WWA1 95 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 JMJD7-PLA2G4BH0Y9G9 81 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 INE1O15225 51 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 YPEL1O60688 119 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 KLF7O75840 302 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 AKR1D1P51857 326 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 QRFPP83859 136 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 SPRNQ5BIV9 151 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 CLLU1Q5K131 121 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 ZCCHC23Q6ZST2 131 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 FAM19A2Q8N3H0 131 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 PSMF1Q92530 271 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 TPT1P8Q9HAU6 139 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 VIRMAQ69YN4 1812 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 KDM5CP41229 1560 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 CCDC171Q6TFL3 1326 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 MUC6Q6W4X9 2439 aa1.58□□□□□ -2.16
TRAPPC13-209ENST00000508304 M0R2N4 97 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 CCL4P13236 92 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 LINC00299Q6ZSB3 139 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 TCTEX1D1Q8N7M0 179 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 OBSCN-AS1Q96MR7 158 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 COL4A1P02462 1669 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 FGD6Q6ZV73 1430 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 MED13Q9UHV7 2174 aa1.57□□□□□ -2.16
TRAPPC13-209ENST00000508304 COL1A1P02452 1464 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 CECR2Q9BXF3 1484 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 TANC2Q9HCD6 1990 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 A0A1W2PPB8 328 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 A0A1W2PRS3 328 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 ZNF727A8MUV8 499 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 KIR3DP1A8MWS1 328 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 CD14P08571 375 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 PLGLB1Q02325 96 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 CCSMST1Q4G0I0 132 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 KRTAP26-1Q6PEX3 210 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 IDO2Q6ZQW0 420 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 PLPP5Q8NEB5 264 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 LINC00526Q96FQ7 95 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 BOKQ9UMX3 212 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 COL24A1Q17RW2 1714 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 UNC13CQ8NB66 2214 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 RFX7Q2KHR2 1363 aa1.56□□□□□ -2.16
TRAPPC13-209ENST00000508304 COPZ1P61923 177 aa1.55□□□□□ -2.16
TRAPPC13-209ENST00000508304 DEFB115Q30KQ5 88 aa1.55□□□□□ -2.16
TRAPPC13-209ENST00000508304 ASB16-AS1Q495Z4 193 aa1.55□□□□□ -2.16
TRAPPC13-209ENST00000508304 UNQ5815/PRO19632Q6UWF5 114 aa1.55□□□□□ -2.16
TRAPPC13-209ENST00000508304 LPAR5Q9H1C0 372 aa1.55□□□□□ -2.16
TRAPPC13-209ENST00000508304 CDC42EP2O14613 210 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 IGHV3-33P01772 117 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 CD3DP04234 171 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 IGLC6P0CF74 106 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 GLYATL3Q5SZD4 288 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 IZUMO2Q6UXV1 221 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 SNX29P2Q8IUI4 249 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 OR10AC1Q8NH08 325 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 NOP16Q9Y3C1 178 aaKnown RBP1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 DNAJC15Q9Y5T4 150 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 LAMB2P55268 1798 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 EXPH5Q8NEV8 1989 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 KIAA1549Q9HCM3 1950 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 SORL1Q92673 2214 aa1.54□□□□□ -2.16
TRAPPC13-209ENST00000508304 FAM25AB3EWG3 89 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 FAM25CB3EWG5 89 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 FAM25GB3EWG6 89 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 NCR2O95944 276 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 LINC00694P0DN24 101 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 IL7P13232 177 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 ADCYAP1P18509 176 aa1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 POLR2JP52435 117 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 RPS25P62851 125 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 CHD3Q12873 2000 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 PSMG3Q9BT73 122 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC13-209ENST00000508304 FANCMQ8IYD8 2048 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 PTPRFP10586 1907 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 ARHGAP31Q2M1Z3 1444 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 CPDO75976 1380 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 TRAV17A0A0B4J275 112 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 ANGP03950 147 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 TSPAN19P0C672 248 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 GUCA1AP43080 201 aaPredicted RBP1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 IQCJQ1A5X6 159 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 Q6ZSA8 131 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 ATOH7Q8N100 152 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 ODF3Q96PU9 254 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 LIMD2Q9BT23 127 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 SAR1AQ9NR31 198 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 TAS2R8Q9NYW2 309 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 MUC4Q99102 2169 aa1.52□□□□□ -2.17
TRAPPC13-209ENST00000508304 USP54Q70EL1 1684 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 SYNJ1O43426 1573 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 FAM236AA0A1B0GUQ0 79 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 FAM236BA0A1B0GV22 79 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 TMEM30CPA0ZSE6 113 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms