RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 TMEM91Q6ZNR0 172 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 OR4S1Q8NGB4 309 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 OTOSQ8NHW6 89 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 LIMD2Q9BT23 127 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 LPAR5Q9H1C0 372 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 WFDC10AQ9H1F0 79 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 METTL1Q9UBP6 276 aaKnown RBP0.52□□□□□ -2.33
SMN2-208ENST00000508258 PTPRGP23470 1445 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 CTTNBP2Q8WZ74 1663 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 IGHV3-30P01768 117 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 CD3DP04234 171 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 FREM3P0C091 2139 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 IGHV3-30-5P0DP03 117 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 HLA-DRB4P13762 266 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 HIST1H1BP16401 226 aaKnown RBP0.51□□□□□ -2.33
SMN2-208ENST00000508258 ETV6P41212 452 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 AKR1D1P51857 326 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 EFNA4P52798 201 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 CKS1BP61024 79 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 SNRPD3P62318 126 aaKnown RBP0.51□□□□□ -2.33
SMN2-208ENST00000508258 SPATA45Q537H7 98 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 TCTEX1D1Q8N7M0 179 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 MAFIPQ8WZ33 124 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 MAGOHBQ96A72 148 aaKnown RBP0.51□□□□□ -2.33
SMN2-208ENST00000508258 AP1S3Q96PC3 154 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 BANF2Q9H503 90 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 CALML5Q9NZT1 146 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 CASP8AP2Q9UKL3 1982 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 DNAJC15Q9Y5T4 150 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 HLA-DRB4X5D2U9 266 aa0.51□□□□□ -2.33
SMN2-208ENST00000508258 POLEQ07864 2286 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 PTPRDP23468 1912 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 KIDINS220Q9ULH0 1771 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 OVOS2A0A0J9YW53 1432 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 OVOS2Q6IE36 1432 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 PRG4Q92954 1404 aaPredicted RBP0.5□□□□□ -2.33
SMN2-208ENST00000508258 TRAV23DV6A0A075B6W5 121 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 IGHV1-24A0A0C4DH33 117 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 LOC107984156A0A0G2JMH3 177 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 PNMA8CA0A1B0GUJ8 204 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 A0A1W2PPB8 328 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 A0A1W2PRS3 328 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 KIR3DP1A8MWS1 328 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 NCR3O14931 201 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 EDF1O60869 148 aaKnown RBP0.5□□□□□ -2.33
SMN2-208ENST00000508258 CKS2P33552 79 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 PCBD1P61457 104 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 SMIM21Q3B7S5 101 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 OCIAD2Q56VL3 154 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 CSAG1Q6PB30 78 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 LINC00575Q6W349 94 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 ARL17AQ8IVW1 177 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 C5orf17Q8NAS9 161 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 OR10AC1Q8NH08 325 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 SMIM7Q9BQ49 75 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 SLC35B3Q9H1N7 401 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 HEATR1Q9H583 2144 aaKnown RBP0.5□□□□□ -2.33
SMN2-208ENST00000508258 TANC2Q9HCD6 1990 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 ANK1P16157 1881 aa0.5□□□□□ -2.33
SMN2-208ENST00000508258 SYNJ1O43426 1573 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 COL6A6A6NMZ7 2263 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 TECTAO75443 2155 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 HELZ2Q9BYK8 2649 aaKnown RBP0.49□□□□□ -2.33
SMN2-208ENST00000508258 MYH1P12882 1939 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 NUPR2A6NF83 97 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 BBIP1A8MTZ0 92 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 CDC42EP2O14613 210 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 SMIM24O75264 130 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 SULT1C4O75897 302 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 IGF2P01344 180 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 TSPAN19P0C672 248 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 MPC1LP0DKB6 136 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 ADCYAP1P18509 176 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 EVI2AP22794 236 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 KDELR1P24390 212 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 RPL37AP61513 92 aaKnown RBP0.49□□□□□ -2.33
SMN2-208ENST00000508258 PLGLB1Q02325 96 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 HIST1H1AQ02539 215 aaPredicted RBP0.49□□□□□ -2.33
SMN2-208ENST00000508258 SMCO1Q147U7 214 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 GLYATL3Q5SZD4 288 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 C3orf62Q6ZUJ4 267 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 C10orf111Q8N326 155 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 Q8N6K4 173 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 LZICQ8WZA0 190 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 COMMD3Q9UBI1 195 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 FLG2Q5D862 2391 aaPredicted RBP0.49□□□□□ -2.33
SMN2-208ENST00000508258 MED13Q9UHV7 2174 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 LRP5O75197 1615 aa0.49□□□□□ -2.33
SMN2-208ENST00000508258 ZFC3H1O60293 1989 aaKnown RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 UHRF1BP1LA0JNW5 1464 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 DISP2A7MBM2 1401 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 DIDO1Q9BTC0 2240 aaKnown RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 GYPBP06028 91 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 IGLC6P0CF74 106 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 FXYD4P59646 89 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 ARPC4P59998 168 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 S100A12P80511 92 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 IDO2Q6ZQW0 420 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 DEFB132Q7Z7B7 95 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms