RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MIFP14174 115 aa14.62□□□□□ -0.07
USP53-203ENST00000507597 GFI1BQ5VTD9 330 aa14.62□□□□□ -0.07
USP53-203ENST00000507597 C2CD4CQ8TF44 421 aa14.62□□□□□ -0.07
USP53-203ENST00000507597 SGK494Q96LW2 274 aa14.62□□□□□ -0.07
USP53-203ENST00000507597 TRAV21A0A0B4J279 112 aa14.61□□□□□ -0.07
USP53-203ENST00000507597 IFITM2Q01629 132 aa14.61□□□□□ -0.07
USP53-203ENST00000507597 ZNF705AQ6ZN79 300 aaPredicted RBP14.61□□□□□ -0.07
USP53-203ENST00000507597 ZFAND2AQ8N6M9 145 aa14.61□□□□□ -0.07
USP53-203ENST00000507597 LINC00479Q96M42 142 aa14.61□□□□□ -0.07
USP53-203ENST00000507597 PYGO2Q9BRQ0 406 aa14.61□□□□□ -0.07
USP53-203ENST00000507597 TRAV12-3A0A0B4J271 114 aa14.6□□□□□ -0.07
USP53-203ENST00000507597 IGLV2-11P01706 119 aa14.6□□□□□ -0.07
USP53-203ENST00000507597 RRN3P1Q2M238 152 aa14.6□□□□□ -0.07
USP53-203ENST00000507597 Q86TA4 180 aa14.6□□□□□ -0.07
USP53-203ENST00000507597 BAGE2Q86Y30 109 aa14.6□□□□□ -0.07
USP53-203ENST00000507597 PCNPQ8WW12 178 aaKnown RBP14.6□□□□□ -0.07
USP53-203ENST00000507597 U3KQK5 164 aa14.6□□□□□ -0.07
USP53-203ENST00000507597 TMEM189A5PLL7 270 aa14.59□□□□□ -0.07
USP53-203ENST00000507597 RPL35P42766 123 aaKnown RBP14.59□□□□□ -0.07
USP53-203ENST00000507597 C1orf158Q8N1D5 194 aa14.59□□□□□ -0.07
USP53-203ENST00000507597 SMIM12Q96EX1 92 aa14.59□□□□□ -0.07
USP53-203ENST00000507597 BIN3Q9NQY0 253 aa14.59□□□□□ -0.07
USP53-203ENST00000507597 RGS13O14921 159 aa14.58□□□□□ -0.08
USP53-203ENST00000507597 LTAP01374 205 aa14.58□□□□□ -0.08
USP53-203ENST00000507597 BTN1A1Q13410 526 aa14.58□□□□□ -0.08
USP53-203ENST00000507597 Q6AWC8 147 aa14.58□□□□□ -0.08
USP53-203ENST00000507597 TMEM183AQ8IXX5 376 aa14.58□□□□□ -0.08
USP53-203ENST00000507597 RETNQ9HD89 108 aa14.58□□□□□ -0.08
USP53-203ENST00000507597 GCGP01275 180 aa14.57□□□□□ -0.08
USP53-203ENST00000507597 GNG4P50150 75 aa14.57□□□□□ -0.08
USP53-203ENST00000507597 FAM159AQ6UWV7 190 aa14.57□□□□□ -0.08
USP53-203ENST00000507597 ZNF493Q6ZR52 646 aa14.57□□□□□ -0.08
USP53-203ENST00000507597 RAB19A4D1S5 217 aa14.56□□□□□ -0.08
USP53-203ENST00000507597 FABP5P3A8MUU1 101 aa14.56□□□□□ -0.08
USP53-203ENST00000507597 ZNF324O75467 553 aaPredicted RBP14.56□□□□□ -0.08
USP53-203ENST00000507597 PFN1P07737 140 aaKnown RBP14.56□□□□□ -0.08
USP53-203ENST00000507597 COX8CQ7Z4L0 72 aa14.56□□□□□ -0.08
USP53-203ENST00000507597 KCNS1Q96KK3 526 aa14.56□□□□□ -0.08
USP53-203ENST00000507597 LINC00467Q9BRT7 94 aa14.56□□□□□ -0.08
USP53-203ENST00000507597 CEBPGP53567 150 aa14.55□□□□□ -0.08
USP53-203ENST00000507597 KIR3DS1Q14943 382 aa14.55□□□□□ -0.08
USP53-203ENST00000507597 EIF4E3Q8N5X7 224 aaKnown RBP14.55□□□□□ -0.08
USP53-203ENST00000507597 TVP23CQ96ET8 276 aa14.55□□□□□ -0.08
USP53-203ENST00000507597 C8orf49Q96NF6 230 aa14.55□□□□□ -0.08
USP53-203ENST00000507597 X6R8D5 127 aa14.55□□□□□ -0.08
USP53-203ENST00000507597 IGHV1OR15-1A0A075B7D0 117 aa14.54□□□□□ -0.08
USP53-203ENST00000507597 HTN1P15515 57 aa14.54□□□□□ -0.08
USP53-203ENST00000507597 C16orf74Q96GX8 76 aa14.54□□□□□ -0.08
USP53-203ENST00000507597 C11orf68Q9H3H3 251 aaKnown RBP14.54□□□□□ -0.08
USP53-203ENST00000507597 TEX48A0A1B0GUV7 120 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 CBY3A6NI87 242 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 ZNF674Q2M3X9 581 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 ANXA2RQ3ZCQ2 193 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 FAM74A3Q4VXF1 159 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 FAM162BQ5T6X4 162 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 PARLQ9H300 379 aa14.53□□□□□ -0.08
USP53-203ENST00000507597 TRGV11A0A075B6L2 103 aa14.52□□□□□ -0.09
USP53-203ENST00000507597 C9JCJ5 164 aa14.52□□□□□ -0.09
USP53-203ENST00000507597 SRP19P09132 144 aaKnown RBP14.52□□□□□ -0.09
USP53-203ENST00000507597 CENPWQ5EE01 88 aa14.52□□□□□ -0.09
USP53-203ENST00000507597 PRR9Q5T870 116 aa14.52□□□□□ -0.09
USP53-203ENST00000507597 TMEM263Q8WUH6 116 aaKnown RBP14.52□□□□□ -0.09
USP53-203ENST00000507597 DAZAP1Q96EP5 407 aaKnown RBP14.52□□□□□ -0.09
USP53-203ENST00000507597 SDF2L1Q9HCN8 221 aa14.52□□□□□ -0.09
USP53-203ENST00000507597 IGHV4-28A0A0C4DH34 117 aa14.51□□□□□ -0.09
USP53-203ENST00000507597 ZNF705GA8MUZ8 300 aaPredicted RBP14.51□□□□□ -0.09
USP53-203ENST00000507597 RBMY1A1P0DJD3 496 aaKnown RBP14.51□□□□□ -0.09
USP53-203ENST00000507597 RBMY1CP0DJD4 496 aa14.51□□□□□ -0.09
USP53-203ENST00000507597 RBMY1FQ15415 496 aaKnown RBP14.51□□□□□ -0.09
USP53-203ENST00000507597 SMIM7Q9BQ49 75 aa14.51□□□□□ -0.09
USP53-203ENST00000507597 DERL1Q9BUN8 251 aa14.51□□□□□ -0.09
USP53-203ENST00000507597 MLST8Q9BVC4 326 aa14.51□□□□□ -0.09
USP53-203ENST00000507597 NAGKQ9UJ70 344 aa14.51□□□□□ -0.09
USP53-203ENST00000507597 ZNF727A8MUV8 499 aa14.5□□□□□ -0.09
USP53-203ENST00000507597 SNURFLB1AK76 121 aa14.5□□□□□ -0.09
USP53-203ENST00000507597 MGST1P10620 155 aaKnown RBP14.5□□□□□ -0.09
USP53-203ENST00000507597 Q8NAQ8 132 aa14.5□□□□□ -0.09
USP53-203ENST00000507597 IL17DQ8TAD2 202 aa14.5□□□□□ -0.09
USP53-203ENST00000507597 ZC2HC1AQ96GY0 325 aa14.5□□□□□ -0.09
USP53-203ENST00000507597 LY96Q9Y6Y9 160 aa14.5□□□□□ -0.09
USP53-203ENST00000507597 TDRG1Q3Y452 100 aa14.49□□□□□ -0.09
USP53-203ENST00000507597 UQCC3Q6UW78 93 aa14.49□□□□□ -0.09
USP53-203ENST00000507597 A0A0J9YWU9 116 aa14.48□□□□□ -0.09
USP53-203ENST00000507597 ORM1P02763 201 aa14.48□□□□□ -0.09
USP53-203ENST00000507597 SOHLH1Q5JUK2 328 aa14.48□□□□□ -0.09
USP53-203ENST00000507597 MUC21Q5SSG8 566 aa14.48□□□□□ -0.09
USP53-203ENST00000507597 IBA57Q5T440 356 aaKnown RBP14.48□□□□□ -0.09
USP53-203ENST00000507597 NHLRC2Q8NBF2 726 aa14.48□□□□□ -0.09
USP53-203ENST00000507597 TIMM8BQ9Y5J9 83 aaPredicted RBP14.48□□□□□ -0.09
USP53-203ENST00000507597 SPART-AS1P0CW21 52 aa14.47□□□□□ -0.09
USP53-203ENST00000507597 ZNF80P51504 273 aaPredicted RBP14.47□□□□□ -0.09
USP53-203ENST00000507597 ZNF415Q09FC8 603 aa14.47□□□□□ -0.09
USP53-203ENST00000507597 PRR27Q6MZM9 219 aa14.47□□□□□ -0.09
USP53-203ENST00000507597 CXorf65A6NEN9 183 aa14.46□□□□□ -0.09
USP53-203ENST00000507597 LYRM9A8MSI8 78 aa14.46□□□□□ -0.09
USP53-203ENST00000507597 SH2D1AO60880 128 aa14.46□□□□□ -0.09
USP53-203ENST00000507597 RNASE8Q8TDE3 154 aaKnown RBP14.46□□□□□ -0.09
USP53-203ENST00000507597 XKRY2A2RUG3 117 aa14.45□□□□□ -0.1
USP53-203ENST00000507597 B4DEV8 164 aa14.45□□□□□ -0.1
USP53-203ENST00000507597 S100A4P26447 101 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms