RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ATG101Q9BSB4 218 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
SCAMP1-202ENST00000506858 ZNF705GA8MUZ8 300 aaPredicted RBP6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 AKR1C3P42330 323 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 CDKN1BP46527 198 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 ZNF80P51504 273 aaPredicted RBP6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 CEBPGP53567 150 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 FLI1Q01543 452 aaPredicted RBP6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 RNF183Q96D59 192 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 FAM19A4Q96LR4 140 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 EIF5A2Q9GZV4 153 aaKnown RBP6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 TREM1Q9NP99 234 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 VAX2Q9UIW0 290 aa6.4□□□□□ -1.38
SCAMP1-202ENST00000506858 RBAKDNA6NC62 111 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 PGPEP1LA6NFU8 196 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 UBE2CO00762 179 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 IFNA1P01562 189 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 GPX1P07203 203 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 AZU1P20160 251 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 LEPP41159 167 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 PPT1P50897 306 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 Q6ZWC4 215 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 C2CD4CQ8TF44 421 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 HIST1H2BAQ96A08 127 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 IGF2BP2-AS1Q96M15 143 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 LINC01587Q99440 93 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 MED9Q9NWA0 146 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 C7orf71A4D174 169 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 EMP1P54849 157 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 PMS2P11Q13670 270 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 ZNF506Q5JVG8 444 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 MUC21Q5SSG8 566 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 Q86TA4 180 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 FAM210AQ96ND0 272 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 SPATA25Q9BR10 227 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 TMEM208Q9BTX3 173 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 ARL2-SNX15V9GYD0 113 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 X6R8D5 127 aa6.39□□□□□ -1.39
SCAMP1-202ENST00000506858 KLLNB2CW77 178 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 K7EQM0 130 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 ZNF324O75467 553 aaPredicted RBP6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 INSP01308 110 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 CRISP2P16562 243 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 TSPOP30536 169 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 CRIP1P50238 77 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 RAB14P61106 215 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 UBE2G1P62253 170 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 ZNF767PQ75MW2 155 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 TMEM75Q8N9X5 138 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 C11orf21Q9P2W6 132 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 NAGKQ9UJ70 344 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 TP53TG3Q9ULZ0 132 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 KLF12Q9Y4X4 402 aa6.38□□□□□ -1.39
SCAMP1-202ENST00000506858 IGHV4-28A0A0C4DH34 117 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 GCGP01275 180 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 SRP19P09132 144 aaKnown RBP6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 TMEM183BQ1AE95 376 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 CLLU1Q5K131 121 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 ZNF705AQ6ZN79 300 aaPredicted RBP6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 BAGE2Q86Y30 109 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 ARL6IP6Q8N6S5 226 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 ZC2HC1AQ96GY0 325 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 ODF3Q96PU9 254 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 C1QTNF4Q9BXJ3 329 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 GOLT1BQ9Y3E0 138 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 U3KQK5 164 aa6.37□□□□□ -1.39
SCAMP1-202ENST00000506858 TRBV20OR9-2A0A075B6H5 130 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 A0A0J9YWU9 116 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 SERTM2A0A1B0GWG4 89 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 CENPWQ5EE01 88 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 DNAH7Q8WXX0 4024 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 GNRH2O43555 120 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 PDE6DO43924 150 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 LTAP01374 205 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 AMBPP02760 352 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 NHLRC4P0CG21 123 aaPredicted RBP6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 OR5I1Q13606 314 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 SMUG1Q53HV7 270 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 PRR27Q6MZM9 219 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 Q8NAQ8 132 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 FMC1Q96HJ9 113 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 NIPSNAP3BQ9BS92 247 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 NDFIP1Q9BT67 221 aa6.36□□□□□ -1.39
SCAMP1-202ENST00000506858 TMSB15BA0A087X1C1 80 aa6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 M0R036 132 aa6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 MGST1P10620 155 aaKnown RBP6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 ANXA2RQ3ZCQ2 193 aa6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 PARLQ9H300 379 aa6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 CELA1Q9UNI1 258 aa6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 TP53TG1Q9Y2A0 90 aa6.35□□□□□ -1.39
SCAMP1-202ENST00000506858 CBY3A6NI87 242 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms