RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 Q6ZTI0 123 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 SCGB1C1Q8TD33 95 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 RXFP4Q8TDU9 374 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 Q9H3A6 140 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 GSN-AS1Q9NRJ2 163 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 MUC4Q99102 2169 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 PRSS29PA6NIE9 313 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 SPINK4O60575 86 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 M6PRP20645 277 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 TCL1AP56279 114 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 RANP62826 216 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 IBA57Q5T440 356 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 Q8TAT8 98 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 ATG101Q9BSB4 218 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 TMPRSS5Q9H3S3 457 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 LINC00588Q9Y4M8 146 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 LENEPQ9Y5L5 61 aa6.31□□□□□ -1.4
PDLIM5-209ENST00000506632 DNAH11Q96DT5 4516 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 PKD1P98161 4303 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 HERC2O95714 4834 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 IGHV1OR15-1A0A075B7D0 117 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 TRAV26-1A0A087WT03 109 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 EIF3GO75821 320 aaKnown RBP eCLIP6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 CSN1S1P47710 185 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 CCL18P55774 89 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 RAB2AP61019 212 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 OR5I1Q13606 314 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 ZNF266Q14584 549 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 ACOT6Q3I5F7 207 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 Q6AWC8 147 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 PQLC2Q6ZP29 291 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 ARL6IP6Q8N6S5 226 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 TMED6Q8WW62 240 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 AQP10Q96PS8 301 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 OTORQ9NRC9 128 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 KLF12Q9Y4X4 402 aa6.3□□□□□ -1.4
PDLIM5-209ENST00000506632 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 TRGV1A0A0A0MS02 117 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 A0A0J9YY99 117 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 PRSS47A8MTI9 375 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 C1orf134Q5TEV5 83 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 SSX7Q7RTT5 188 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 VSIG2Q96IQ7 327 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 PSMG3Q9BT73 122 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 MED28Q9H204 178 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 PKHD1P08F94 4074 aa6.29□□□□□ -1.4
PDLIM5-209ENST00000506632 TRGV2A0A075B6R0 118 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 A0A1W2PPV4 95 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 PGPA6NDG6 321 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 GIPP09681 153 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 STAG3L2P0CL84 134 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 STAG3L3P0CL85 134 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 Q5BKY6 102 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 SOHLH1Q5JUK2 328 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 OR10G4Q8NGN3 311 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 OR10G9Q8NGN4 311 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 OR10G7Q8NGN6 311 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 SUN5Q8TC36 379 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 ASB13Q8WXK3 278 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 ST6GAL2Q96JF0 529 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
PDLIM5-209ENST00000506632 A0A096LPF7 62 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 RNF222A6NCQ9 220 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 HMGB3O15347 200 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 ARL14EPLP0DKL9 152 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 ATP6V0CP27449 155 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 CDC34P49427 236 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 ESRGQ1W209 222 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 TDRG1Q3Y452 100 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 FAM74A1Q5RGS3 127 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 CFAP161Q6P656 301 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 HSD17B11Q8NBQ5 300 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 TVP23CQ96ET8 276 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 HYLS1Q96M11 299 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 KRTAP1-5Q9BYS1 174 aa6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 MRPL16Q9NX20 251 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-209ENST00000506632 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 SERF2P84101 59 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 ZNF415Q09FC8 603 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 GOLT1AQ6ZVE7 132 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 CMTM2Q8TAZ6 248 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 RAB24Q969Q5 203 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 Q9H8V8 135 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 MDFICQ9P1T7 246 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 TNFSF18Q9UNG2 199 aa6.26□□□□□ -1.41
PDLIM5-209ENST00000506632 TRAV8-1A0A0A6YYK1 113 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 A0A1W2PPQ1 181 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 G3V3Q6 166 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 MBP02144 154 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 GCHFRP30047 84 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 GNG5P63218 68 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 FHL2Q14192 279 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms