RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GTF2A1P52655 376 aaPredicted RBP0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 MAXP61244 160 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 MRPS36P82909 103 aaKnown RBP0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 FAM74A1Q5RGS3 127 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 Q5XG85 94 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 TEX261Q6UWH6 196 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 MORN4Q8NDC4 146 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 OR5A2Q8NGI9 324 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 OR51A4Q8NGJ6 313 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 NAT14Q8WUY8 206 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 LINC00052Q96N35 136 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 OR4C12Q96R67 309 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 TAS2R7Q9NYW3 318 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 GSKIPQ9P0R6 139 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 ORMDL1Q9P0S3 153 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 TPRKBQ9Y3C4 175 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 U3KQ87 197 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 MAP1BP46821 2468 aaKnown RBP0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 HERC2O95714 4834 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 STAB1Q9NY15 2570 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 MED23Q9ULK4 1368 aa0.67□□□□□ -2.3
TOPBP1-204ENST00000505804 ZFHX3Q15911 3703 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 ERBINQ96RT1 1412 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CHD3Q12873 2000 aaKnown RBP0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 RANBP2P49792 3224 aaKnown RBP0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 TRBV6-4A0A1B0GX49 114 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 C9orf170A2RU37 121 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 C5orf58C9J3I9 102 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 C9JAW5 83 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 H3BMG7 143 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 TNFSF15O95150 251 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 TPT1P13693 172 aaKnown RBP0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 SDC4P31431 198 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 RPL22P35268 128 aaKnown RBP0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 ARPC4P59998 168 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CIRBPQ14011 172 aaKnown RBP0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 MPV17LQ2QL34 196 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 MORN2Q502X0 79 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 GKN2Q86XP6 184 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CLEC2BQ92478 149 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 PSMF1Q92530 271 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CST11Q9H112 138 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CDC42SE1Q9NRR8 79 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 HIGD1AQ9Y241 93 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 BSNQ9UPA5 3926 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CCDC168Q8NDH2 2452 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 NCOR1O75376 2440 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 CSMD1Q96PZ7 3565 aa0.66□□□□□ -2.3
TOPBP1-204ENST00000505804 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.3
TOPBP1-204ENST00000505804 PLXNA2O75051 1894 aa0.65□□□□□ -2.3
TOPBP1-204ENST00000505804 MYO18AQ92614 2054 aaKnown RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 IGSF10Q6WRI0 2623 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 MUC4Q99102 2169 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 A0A1B0GW64 132 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 LOC107986453A0A1B0GWG9 222 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 TMEM189A5PLL7 270 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 UQCRQO14949 82 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 INE1O15225 51 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 OR2H2O95918 312 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 DBIP07108 87 aaKnown RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 SAA1P0DJI8 122 aaPredicted RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 CCL4P13236 92 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 COX7CP15954 63 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 ZNF25P17030 456 aaPredicted RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 CMPK1P30085 196 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 FOXA3P55318 350 aaPredicted RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 S100A12P80511 92 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 SMCO1Q147U7 214 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 FOXI2Q6ZQN5 318 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 TEN1Q86WV5 123 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 TCTE3Q8IZS6 198 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 LINC00269Q8N2A0 174 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 OR5AK2Q8NH90 309 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 ZNF431Q8TF32 576 aaPredicted RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 MAFIPQ8WZ33 124 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 LZICQ8WZA0 190 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 BORCS5Q969J3 196 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 C2CD3Q4AC94 2353 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 MYH6P13533 1939 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 HELZP42694 1942 aaKnown RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 MYH13Q9UKX3 1938 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 ZCCHC6Q5VYS8 1495 aaKnown RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 NBEAL1Q6ZS30 2694 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 FREM3P0C091 2139 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 UBR5O95071 2799 aaPredicted RBP0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 BICRAQ9NZM4 1560 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 FAT4Q6V0I7 4981 aa0.65□□□□□ -2.31
TOPBP1-204ENST00000505804 ARHGAP31Q2M1Z3 1444 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 HMGXB3Q12766 1538 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 KIF13AQ9H1H9 1805 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 FLNAP21333 2647 aaKnown RBP0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 PKD1L1Q8TDX9 2849 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 F8W1H4 67 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 NUPR1O60356 82 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 DNAL4O96015 105 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 TRACP01848 142 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 HBDP02042 147 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms