RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 CASC2Q6XLA1 102 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 OR10AG1Q8NH19 301 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 CIB3Q96Q77 187 aaPredicted RBP2.02□□□□□ -2.09
HERC3-209ENST00000504994 MED9Q9NWA0 146 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 LSM2Q9Y333 95 aaKnown RBP2.02□□□□□ -2.09
HERC3-209ENST00000504994 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.02□□□□□ -2.09
HERC3-209ENST00000504994 CECR2Q9BXF3 1484 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 MUC4Q99102 2169 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 IGHV1-24A0A0C4DH33 117 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 M0R129 80 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 EDF1O60869 148 aaKnown RBP2.01□□□□□ -2.09
HERC3-209ENST00000504994 SULT1C4O75897 302 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 COPZ1P61923 177 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 UNQ6190/PRO20217Q6UXQ8 127 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 C5orf17Q8NAS9 161 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 SLC35B3Q9H1N7 401 aa2.01□□□□□ -2.09
HERC3-209ENST00000504994 FGD6Q6ZV73 1430 aa2□□□□□ -2.09
HERC3-209ENST00000504994 EML5Q05BV3 1969 aa2□□□□□ -2.09
HERC3-209ENST00000504994 CCL25O15444 150 aa2□□□□□ -2.09
HERC3-209ENST00000504994 NUPR1O60356 82 aa2□□□□□ -2.09
HERC3-209ENST00000504994 NCR2O95944 276 aa2□□□□□ -2.09
HERC3-209ENST00000504994 RPL13AP3Q6NVV1 102 aa2□□□□□ -2.09
HERC3-209ENST00000504994 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
HERC3-209ENST00000504994 OR10AC1Q8NH08 325 aa2□□□□□ -2.09
HERC3-209ENST00000504994 KIAA1549LQ6ZVL6 1849 aa2□□□□□ -2.09
HERC3-209ENST00000504994 MCM3APO60318 1980 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 ANK1P16157 1881 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 LOC110117498A0A087WWA1 95 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 PNMA8CA0A1B0GUJ8 204 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 A0A1B0GV90 55 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 ZNF670-ZNF695F2Z2N8 137 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 H3BRM9 83 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 GNG7O60262 68 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 RRAS2P62070 204 aaPredicted RBP1.99□□□□□ -2.09
HERC3-209ENST00000504994 NEDD8Q15843 81 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 MPV17LQ2QL34 196 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 SPRNQ5BIV9 151 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 SMIM7Q9BQ49 75 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 SNURFQ9Y675 71 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 PTPRDP23468 1912 aa1.99□□□□□ -2.09
HERC3-209ENST00000504994 IFITM5A6NNB3 132 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 M0R2N4 97 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 INE1O15225 51 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 IGHV3-33P01772 117 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 ZNF25P17030 456 aaPredicted RBP1.98□□□□□ -2.09
HERC3-209ENST00000504994 SELENOWP63302 87 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 CYSTM1Q9H1C7 97 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 NCOA3Q9Y6Q9 1424 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 WDR97A6NE52 1622 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 UNC13CQ8NB66 2214 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 PEG3Q9GZU2 1588 aa1.98□□□□□ -2.09
HERC3-209ENST00000504994 IBTKQ9P2D0 1353 aaPredicted RBP1.98□□□□□ -2.09
HERC3-209ENST00000504994 NINQ8N4C6 2090 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 MYO18AQ92614 2054 aaKnown RBP1.97□□□□□ -2.09
HERC3-209ENST00000504994 COL4A1P02462 1669 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 TRBV20-1A0A075B6N2 111 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 CDC42EP2O14613 210 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 KLF7O75840 302 aaPredicted RBP1.97□□□□□ -2.09
HERC3-209ENST00000504994 IZUMO2Q6UXV1 221 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 SDF2Q99470 211 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 LINC00470Q9BZP3 86 aa1.97□□□□□ -2.09
HERC3-209ENST00000504994 FOCADQ5VW36 1801 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 KIF13AQ9H1H9 1805 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 KIDINS220Q9ULH0 1771 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 IGKV3D-7A0A0C4DH55 119 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 DNAL4O96015 105 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 RBP4P02753 201 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 PLGLB1Q02325 96 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 CCSMST1Q4G0I0 132 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 ARL11Q969Q4 196 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 ZFP30Q9Y2G7 519 aa1.96□□□□□ -2.1
HERC3-209ENST00000504994 ADGRB2O60241 1585 aa1.95□□□□□ -2.1
HERC3-209ENST00000504994 MYH7P12883 1935 aa1.95□□□□□ -2.1
HERC3-209ENST00000504994 PHLPP1O60346 1717 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 BBIP1A8MTZ0 92 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 M0R2P5 195 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 TPST1O60507 370 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 PITX3O75364 302 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 TCTEX1D1Q8N7M0 179 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 C1orf54Q8WWF1 131 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 ERCC6Q03468 1493 aa1.94□□□□□ -2.1
HERC3-209ENST00000504994 TRBV6-7A0A0A0MS04 114 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 A0A1W2PPB8 328 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 A0A1W2PRS3 328 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 KIR3DP1A8MWS1 328 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 LINC00587B1AMM8 73 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 J3QKU1 62 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 PPYP01298 95 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 ADCYAP1P18509 176 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 EMX2Q04743 252 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
HERC3-209ENST00000504994 SNX29P2Q8IUI4 249 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 OBSCN-AS1Q96MR7 158 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 TMEM14CQ9P0S9 112 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 SDK1Q7Z5N4 2213 aa1.93□□□□□ -2.1
HERC3-209ENST00000504994 A0A0G2JMM0 328 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms