RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 LYRM1O43325 122 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 MPC2O95563 127 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRACP01848 142 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 HBDP02042 147 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 CXCL1P09341 107 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 RNASE4P34096 147 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 C9orf153Q5TBE3 101 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 LINC00299Q6ZSB3 139 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 COA5Q86WW8 74 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 SIGLECL1Q8N7X8 197 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 PFN4Q8NHR9 129 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 PSMF1Q92530 271 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 VAMP8Q9BV40 100 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 AGPAT4-IT1Q9H0P7 198 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRIOBPQ9H2D6 2365 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 RGS12O14924 1447 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 PIK3C2AO00443 1686 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 STRCQ7RTU9 1775 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRGV2A0A075B6R0 118 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SPAARA0A1B0GVQ0 90 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 A0A1W2PRS3 328 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 CCDC179H3BU77 68 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 HYPMO75409 117 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SLC25A5P05141 298 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRGC1P0CF51 173 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZNF705BP0CI00 300 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SLC25A4P12235 298 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 KLRD1Q13241 179 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 DIAPH2-AS1Q14236 149 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 IQCJQ1A5X6 159 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 PYY3Q5JQD4 70 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 CLLU1Q5K131 121 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 FAM27BQ5VT28 67 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 OR2T2Q6IF00 324 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 C7orf65Q6ZTY9 151 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 LINC00311Q8N616 119 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 OR5AK2Q8NH90 309 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SPACA4Q8TDM5 124 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 LINC00526Q96FQ7 95 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 S100A13Q99584 98 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 LINC00467Q9BRT7 94 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SLC35B3Q9H1N7 401 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SERP1Q9Y6X1 66 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 FOCADQ5VW36 1801 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 SYNJ1O43426 1573 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 PHLPP1O60346 1717 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 KIAA1551Q9HCM1 1747 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 FER1L6Q2WGJ9 1857 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 MALRD1Q5VYJ5 2156 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 CCDC141Q6ZP82 1450 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 TEX14Q8IWB6 1497 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 RIMBP3CA6NJZ7 1639 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 RIMBP3BA6NNM3 1639 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 RIMBP3Q9UFD9 1639 aa1.88□□□□□ -2.11
TRAPPC13-205ENST00000504243 EML6Q6ZMW3 1958 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 LOC107986453A0A1B0GWG9 222 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZNF736B4DX44 427 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 MCRIP1C9JLW8 97 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 H3BQ15 152 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 SBF1O95248 1867 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 CTSDP07339 412 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 SAA1P0DJI8 122 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 CRYGAP11844 174 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 CLIP1P30622 1438 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 ASB16-AS1Q495Z4 193 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 KHDC3LQ587J8 217 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 NRKQ7Z2Y5 1582 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 FAM216BQ8N7L0 139 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 DIRC1Q969H9 104 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZC2HC1AQ96GY0 325 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 NAA38Q9BRA0 125 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 TAS2R4Q9NYW5 299 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 CFTRP13569 1480 aa1.87□□□□□ -2.11
TRAPPC13-205ENST00000504243 MAP3K1Q13233 1512 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 AKAP11Q9UKA4 1901 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 UACAQ9BZF9 1416 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 SSSCA1O60232 199 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZNF737O75373 536 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 SNCGO76070 127 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 GYPAP02724 150 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 CLPSP04118 112 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 SHBGP04278 402 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 POLR2JP52435 117 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 PCBD1P61457 104 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 SNRPD3P62318 126 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 CDK5R1Q15078 307 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 PEA15Q15121 130 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 C12orf73Q69YU5 71 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 Q6AWC8 147 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 Q6ZUT4 128 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 WFDC11Q8NEX6 87 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 PRO1933Q9H354 126 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 CEP164Q9UPV0 1460 aa1.86□□□□□ -2.11
TRAPPC13-205ENST00000504243 PTPRBP23467 1997 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRPM1Q7Z4N2 1603 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 PHIPQ8WWQ0 1821 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 CCDC88CQ9P219 2028 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms