RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 C17orf77Q96MU5 243 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 IGHV4-30-2A0A087WSY4 118 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 IGLV2-23P01705 113 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 XCL1P47992 114 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 ARTNQ5T4W7 220 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 DYNAPQ8N1N2 210 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 DSCR8Q96T75 97 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 PYGO2Q9BRQ0 406 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 SPTBP11277 2137 aa5.65□□□□□ -1.5
SYNPO2-205ENST00000504178 ZNF664Q8N3J9 261 aa5.65□□□□□ -1.5
SYNPO2-205ENST00000504178 DLEU1O43261 78 aa5.65□□□□□ -1.5
SYNPO2-205ENST00000504178 SMIM2Q9BVW6 85 aa5.65□□□□□ -1.5
SYNPO2-205ENST00000504178 MDC1Q14676 2089 aaKnown RBP5.65□□□□□ -1.5
SYNPO2-205ENST00000504178 RBAKDNA6NC62 111 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 C16orf74Q96GX8 76 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 Q9HAA7 133 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 UBE2V1Q13404 147 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 ZNF491Q8N8L2 437 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 C20orf78Q9BR46 151 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV4-61A0A0C4DH41 118 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 GP9P14770 177 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 PYY3Q5JQD4 70 aa5.65□□□□□ -1.51
SYNPO2-205ENST00000504178 TEX48A0A1B0GUV7 120 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 WT1P19544 449 aaPredicted RBP5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 RSPO1Q2MKA7 263 aaPredicted RBP5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 CEND1Q8N111 149 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 NPBQ8NG41 125 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 C9JQL5 133 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 LGALS9BQ3B8N2 356 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 MORN5Q5VZ52 161 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 LGALS9CQ6DKI2 356 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 KLF2Q9Y5W3 355 aaPredicted RBP5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 ICOSQ9Y6W8 199 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 IGLV3-1P01715 115 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 CENPVL3A0A0U1RRI6 287 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 K7EQD1 137 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 KNL1Q8NG31 2342 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 CEP290O15078 2479 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 FGF6P10767 208 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 GTSF1LQ9H1H1 148 aa5.64□□□□□ -1.51
SYNPO2-205ENST00000504178 A8MWP6 167 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 NDUFS5O43920 106 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 C11orf53Q8IXP5 236 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 DEFB105AQ8NG35 78 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 IGLC7A0M8Q6 106 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 UTF1Q5T230 341 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 UBL5Q9BZL1 73 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 MRPL35Q9NZE8 188 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 TRBV20-1A0A075B6N2 111 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 WIPF3A6NGB9 483 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 IGFL2Q6UWQ7 119 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 FREM3P0C091 2139 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 C9orf118A6NHY6 69 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 F8W735 103 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 ADORA2A-AS1P86434 159 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 IGF2-ASQ6U949 168 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 HELZP42694 1942 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 PIFOQ8TCI5 191 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 RITA1Q96K30 269 aa5.63□□□□□ -1.51
SYNPO2-205ENST00000504178 TRIOBPQ9H2D6 2365 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 J3QQQ9 107 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 K7EN84 100 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV3-30P01768 117 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV3-33P01772 117 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV3-30-3P0DP02 117 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV3-30-5P0DP03 117 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 HAMPP81172 84 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHG4P01861 327 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 CRYGCP07315 174 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 POU2AF1Q16633 256 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 PLXND1Q9Y4D7 1925 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 COX8AP10176 69 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 GYPEP15421 78 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 NRGNQ92686 78 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 EGR2P11161 476 aaPredicted RBP5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 TIRAPP58753 221 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 SLC25A29Q8N8R3 303 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 C10orf105Q8TEF2 133 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 Q6ZWC4 215 aa5.62□□□□□ -1.51
SYNPO2-205ENST00000504178 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 F8VRH5 84 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 AGPAT4-IT1Q9H0P7 198 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV4OR15-8A0A075B7B6 117 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 A0A087WW49 117 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV7-81A0A0B4J1V7 117 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 BUB3O43684 328 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 AJUBAQ96IF1 538 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 PRR20EP86478 221 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 PRR20CP86479 221 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 PRR20DP86480 221 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 PRR20BP86481 221 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 PRR20AP86496 221 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 KRTAP27-1Q3LI81 207 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms