RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PRO0461Q9UI25 63 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 RAXQ9Y2V3 346 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 RNF114Q9Y508 228 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 HILPDAQ9Y5L2 63 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 DNAH1Q9P2D7 4330 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 IGKV1D-43A0A0B4J1Z2 117 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 PGPA6NDG6 321 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 OOSP1A8MZH6 123 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MRPL33O75394 65 aaKnown RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 DUSP14O95147 198 aaKnown RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 IGLV2-8P01709 118 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MFAP4P55083 255 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 FOXG1P55316 489 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TSACCQ96A04 125 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 IGF2BP2-AS1Q96M15 143 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 JMJD8Q96S16 334 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 FAM173AQ9BQD7 235 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF71Q9NQZ8 489 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TMEM14CQ9P0S9 112 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 COL12A1Q99715 3063 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 C12orf77C9JDV5 145 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 NDUFC2-KCTD14E9PQ53 114 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 NPFFO15130 113 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 CSN3P07498 182 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 CXCL5P42830 114 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FXYD2P54710 66 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 XGP55808 180 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 UBE2D3P61077 147 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 UBE2D2P62837 147 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 HES3Q5TGS1 186 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 MAFAQ8NHW3 353 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-204ENST00000503468 LYZL4Q96KX0 146 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 PRR14LQ5THK1 2151 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 TRAV2A0A0B4J234 112 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 SH2D7A6NKC9 451 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-204ENST00000503468 F5H768 121 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 C15orf65H3BRN8 121 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FOXF2Q12947 444 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 CARD19Q96LW7 228 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 SS18L2Q9UHA2 77 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 PRO1854Q9UHT4 67 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 ANK3Q12955 4377 aaKnown RBP2.2□□□□□ -2.06
NEDD4-204ENST00000503468 TRBV7-7A0A0K0K1E9 115 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 H7C1H1 209 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 SLC25A20O43772 301 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 C6orf15Q6UXA7 325 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF841Q6ZN19 808 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FAM214BQ7L5A3 538 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 DAND5Q8N907 189 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 PHLDA1Q8WV24 401 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-204ENST00000503468 LINC00526Q96FQ7 95 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 TIMD4Q96H15 378 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 CDIP1Q9H305 208 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 TRAV24A0A0B4J272 114 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 IGHV5-10-1A0A0J9YXX1 117 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 C17orf98A8MV24 154 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 TNFSF12O43508 249 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FCGR3BO75015 233 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 RPL7P18124 248 aaKnown RBP2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FAM120AOSQ5T036 256 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 SH2D6Q7Z4S9 175 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 ZMAT4Q9H898 229 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 NPIPB5A8MRT5 1133 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 P0DMU3 169 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FAM231AP0DMU4 169 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 FAM231CP0DMU5 169 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 SDIM1Q6ZPB5 146 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 ANKRD29Q8N6D5 301 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 ZDHHC16Q969W1 377 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 PRADC1Q9BSG0 188 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 PRORYQ9H606 182 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 TMEM14BQ9NUH8 114 aa2.2□□□□□ -2.06
NEDD4-204ENST00000503468 XIRP2A4UGR9 3374 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 IGKV1-27A0A075B6S5 117 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 MYOD1P15172 320 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 PRTN3P24158 256 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 CXCL12P48061 93 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 DLX1P56177 255 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 SIGLEC15Q6ZMC9 328 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 MIR17HGQ75NE6 70 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 KIR2DL4Q99706 377 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 ASCL2Q99929 193 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 METRNQ9UJH8 293 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 KMT2CQ8NEZ4 4911 aaKnown RBP2.19□□□□□ -2.06
NEDD4-204ENST00000503468 K7EM74 188 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 BCE1O60756 84 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 NDUFA7O95182 113 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 IZUMO4Q1ZYL8 232 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 FGFBP3Q8TAT2 258 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 SRSF12Q8WXF0 261 aaKnown RBP2.19□□□□□ -2.06
NEDD4-204ENST00000503468 OVOL2Q9BRP0 275 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 A0A1W2PNR3 127 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF816Q0VGE8 651 aaPredicted RBP2.19□□□□□ -2.06
NEDD4-204ENST00000503468 ATXN8Q156A1 80 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 FAM57AQ8TBR7 257 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 CYYR1Q96J86 154 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 FAM167A-AS1Q96KT0 104 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 LENEPQ9Y5L5 61 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 TRAV8-4A0A0B4J246 113 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms