RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CTXN2P0C2S0 81 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 FABP2P12104 132 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 TPT1P13693 172 aaKnown RBP-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 TMED2Q15363 201 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 IDO2Q6ZQW0 420 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 OR8J3Q8NGG0 315 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 ISOC1Q96CN7 298 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 BORCS8Q96FH0 119 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 DSCR8Q96T75 97 aa-0.47□□□□□ -2.48
SMAD1-203ENST00000502342 PTPN13Q12923 2485 aa-0.47□□□□□ -2.49
SMAD1-203ENST00000502342 ADGBQ8N7X0 1667 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 RREB1Q92766 1687 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 A0A096LNT2 108 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 F2Z2F3 143 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 TPST1O60507 370 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 BCL2P10415 239 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 DNAJB13P59910 316 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 NUP35Q8NFH5 326 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 OR5H6Q8NGV6 325 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 OR13C6PQ8NH95 151 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 DMAC1Q96GE9 116 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 COMMD3Q9UBI1 195 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 FAM208BQ5VWN6 2430 aa-0.48□□□□□ -2.49
SMAD1-203ENST00000502342 CSN2P05814 226 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 SAA1P0DJI8 122 aaPredicted RBP-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 IL7P13232 177 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 MAXP61244 160 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 ARF6P62330 175 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 IQCJQ1A5X6 159 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 DIRC1Q969H9 104 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 GINS3Q9BRX5 216 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 TAF9BQ9HBM6 251 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 LAMC3Q9Y6N6 1575 aa-0.49□□□□□ -2.49
SMAD1-203ENST00000502342 MAP2P11137 1827 aaKnown RBP-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 SPAG17Q6Q759 2223 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 LOC107986453A0A1B0GWG9 222 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 CDC42EP2O14613 210 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 EDF1O60869 148 aaKnown RBP-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 IGKCP01834 107 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 HSD11B1P28845 292 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 CCSMST1Q4G0I0 132 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 Q5XG85 94 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 DHRS4L2Q6PKH6 230 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 LYPD5Q6UWN5 251 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 PRELID3AQ96N28 172 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 ATG5Q9H1Y0 275 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 OTORQ9NRC9 128 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 SOGA1O94964 1423 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 TRAPPC8Q9Y2L5 1435 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 DLC1Q96QB1 1528 aa-0.5□□□□□ -2.49
SMAD1-203ENST00000502342 STAB1Q9NY15 2570 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 A0A0G2JMM0 328 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 TMEM189A5PLL7 270 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 MCRIP1C9JLW8 97 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 FLNAP21333 2647 aaKnown RBP-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 BLMP54132 1417 aaPredicted RBP-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 MRPS25P82663 173 aaKnown RBP-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 FADDQ13158 208 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 LTC4SQ16873 150 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 MED13LQ71F56 2210 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 ANKRD31Q8N7Z5 1873 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 C19orf12Q9NSK7 152 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 FKBP11Q9NYL4 201 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 MED11Q9P086 117 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 LAMTOR3Q9UHA4 124 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 MPC1Q9Y5U8 109 aa-0.51□□□□□ -2.49
SMAD1-203ENST00000502342 CADP27708 2225 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 TNS1Q9HBL0 1735 aaKnown RBP-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 CHD9Q3L8U1 2897 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 IFITM5A6NNB3 132 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 C9JAW5 83 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 IFNA1P01562 189 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 GTF2A1P52655 376 aaPredicted RBP-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 LRTM1Q9HBL6 345 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 IL20Q9NYY1 176 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 NINQ8N4C6 2090 aa-0.52□□□□□ -2.49
SMAD1-203ENST00000502342 TCOF1Q13428 1488 aaKnown RBP-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 TECPR2O15040 1411 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 CPDO75976 1380 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 MYH2Q9UKX2 1941 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 TRDV1A0A1B0GX56 115 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 MFSD11O43934 449 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 CCKP06307 115 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 SDC4P31431 198 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 SDC2P34741 201 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 GLRXP35754 106 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 UNQ5815/PRO19632Q6UWF5 114 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 SMIM7Q9BQ49 75 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 COA4Q9NYJ1 87 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 DLEC1Q9Y238 1755 aa-0.53□□□□□ -2.49
SMAD1-203ENST00000502342 F5P12259 2224 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 GABARAPH6UMI1 98 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 S100A6P06703 90 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 RPL19P84098 196 aaKnown RBP-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 RHOHQ15669 191 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 FAM24BQ8N5W8 94 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 TEX29Q8N6K0 151 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 NAT14Q8WUY8 206 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms