RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 ZNF415Q09FC8 603 aa7.58□□□□□ -1.2
LSAMP-206ENST00000498645 IBA57Q5T440 356 aaKnown RBP7.58□□□□□ -1.2
LSAMP-206ENST00000498645 MRPL32Q9BYC8 188 aaKnown RBP7.58□□□□□ -1.2
LSAMP-206ENST00000498645 WDR61Q9GZS3 305 aaKnown RBP7.58□□□□□ -1.2
LSAMP-206ENST00000498645 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
LSAMP-206ENST00000498645 TRGV4A0A0C4DH28 118 aa7.57□□□□□ -1.2
LSAMP-206ENST00000498645 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
LSAMP-206ENST00000498645 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
LSAMP-206ENST00000498645 S100ZQ8WXG8 99 aa7.57□□□□□ -1.2
LSAMP-206ENST00000498645 NMES1Q9C002 83 aa7.57□□□□□ -1.2
LSAMP-206ENST00000498645 SCRT2Q9NQ03 307 aa7.57□□□□□ -1.2
LSAMP-206ENST00000498645 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
LSAMP-206ENST00000498645 HHLA3Q9XRX5 114 aa7.57□□□□□ -1.2
LSAMP-206ENST00000498645 H0YIZ8 118 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 PRAF2O60831 178 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 SFTA3P0C7M3 94 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 CRYBA4P53673 196 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 TMEM183BQ1AE95 376 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 FFAR4Q5NUL3 377 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 Q8N1X5 172 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 HYLS1Q96M11 299 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 ATP5SQ99766 215 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 SMIM3Q9BZL3 60 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 NAGKQ9UJ70 344 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 RPH3ALQ9UNE2 315 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
LSAMP-206ENST00000498645 EIF3GO75821 320 aaKnown RBP eCLIP7.55□□□□□ -1.2
LSAMP-206ENST00000498645 CYCSP99999 105 aaKnown RBP7.55□□□□□ -1.2
LSAMP-206ENST00000498645 FHL2Q14192 279 aa7.55□□□□□ -1.2
LSAMP-206ENST00000498645 MRPL23Q16540 153 aaKnown RBP7.55□□□□□ -1.2
LSAMP-206ENST00000498645 KHDC3LQ587J8 217 aa7.55□□□□□ -1.2
LSAMP-206ENST00000498645 LYPD5Q6UWN5 251 aa7.55□□□□□ -1.2
LSAMP-206ENST00000498645 Q6ZRN7 208 aaPredicted RBP7.55□□□□□ -1.2
LSAMP-206ENST00000498645 PPP1R1CQ8WVI7 109 aa7.55□□□□□ -1.2
LSAMP-206ENST00000498645 PCNPQ8WW12 178 aaKnown RBP7.55□□□□□ -1.2
LSAMP-206ENST00000498645 MDFICQ9P1T7 246 aa7.55□□□□□ -1.2
LSAMP-206ENST00000498645 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 INMT-MINDY4F8WBC2 141 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 EREGO14944 169 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 SSNA1O43805 119 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 UPK1BO75841 260 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 SRIP30626 198 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 H2BFSP57053 126 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 SLAQ13239 276 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 ZNF266Q14584 549 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 NEGR1Q7Z3B1 354 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 ZNF479Q96JC4 524 aa7.54□□□□□ -1.2
LSAMP-206ENST00000498645 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
LSAMP-206ENST00000498645 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 TRBV7-9A0A0J9YWB2 115 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 K7EQD1 137 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 IFNA5P01569 189 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 GYPEP15421 78 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 TAS2R45P59539 299 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 LYPD1Q8N2G4 141 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 CMTM2Q8TAZ6 248 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 HSPB11Q9Y547 144 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 LY96Q9Y6Y9 160 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 DNAH5Q8TE73 4624 aa7.53□□□□□ -1.2
LSAMP-206ENST00000498645 F6UZH7 168 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 MPC2O95563 127 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 PET100P0DJ07 73 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 RPL12P30050 165 aaKnown RBP7.52□□□□□ -1.21
LSAMP-206ENST00000498645 IFITM3Q01628 133 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 Q6AWC8 147 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 LINC00299Q6ZSB3 139 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 GOLT1AQ6ZVE7 132 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 WFDC10BQ8IUB3 73 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 PTTG2Q9NZH5 202 aa7.52□□□□□ -1.21
LSAMP-206ENST00000498645 TRAV9-2A0A087WT02 112 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 PGPA6NDG6 321 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 FAM74A1Q5RGS3 127 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 NFE4Q86UQ8 179 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 OR4C5Q8NGB2 326 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 OR10G4Q8NGN3 311 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 SPXQ9BT56 116 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 OTORQ9NRC9 128 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 MBD2Q9UBB5 411 aa7.51□□□□□ -1.21
LSAMP-206ENST00000498645 TRAV8-1A0A0A6YYK1 113 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 LOC100131303A0A0U1RQF7 123 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 A0A1W2PPV4 95 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 C9JCJ5 164 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 HMGB3O15347 200 aaKnown RBP7.5□□□□□ -1.21
LSAMP-206ENST00000498645 GNRH2O43555 120 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 ORM1P02763 201 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 EVI2AP22794 236 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 RAB2AP61019 212 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 GNG5P63218 68 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 ACOT6Q3I5F7 207 aaPredicted RBP7.5□□□□□ -1.21
LSAMP-206ENST00000498645 NHLRC2Q8NBF2 726 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 RASL10AQ92737 203 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 TXNDC17Q9BRA2 123 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms