RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 DTX2Q86UW9 622 aa12.71□□□□□ -0.38
COL6A1-206ENST00000498614 TTC9CQ8N5M4 171 aa12.71□□□□□ -0.38
COL6A1-206ENST00000498614 Q8N6K4 173 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 VGLL1Q99990 258 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 SPCS1Q9Y6A9 102 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
COL6A1-206ENST00000498614 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-206ENST00000498614 USP9YO00507 2555 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-206ENST00000498614 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
COL6A1-206ENST00000498614 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
COL6A1-206ENST00000498614 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
COL6A1-206ENST00000498614 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
COL6A1-206ENST00000498614 UBTD1Q9HAC8 227 aa12.69□□□□□ -0.38
COL6A1-206ENST00000498614 IGHV3OR16-8A0A075B7F1 116 aa12.69□□□□□ -0.38
COL6A1-206ENST00000498614 DOPEY2Q9Y3R5 2298 aa12.68□□□□□ -0.38
COL6A1-206ENST00000498614 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
COL6A1-206ENST00000498614 IGHV3-35A0A0C4DH35 117 aa12.68□□□□□ -0.38
COL6A1-206ENST00000498614 ZNF48Q96MX3 618 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-206ENST00000498614 SIRPDQ9H106 197 aa12.68□□□□□ -0.38
COL6A1-206ENST00000498614 PLA2G2AP14555 144 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 LEPP41159 167 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 MINOS1Q5TGZ0 78 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 MAP1LC3AQ9H492 121 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 MINOS1-NBL1R4GNA1 71 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 FBN2P35556 2912 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 IGHG4P01861 327 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 EBI3Q14213 229 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 S100A7AQ86SG5 101 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
COL6A1-206ENST00000498614 EVI2AP22794 236 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 GCSHP23434 173 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 FXYD2P54710 66 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 ODF1Q14990 250 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 Q8N9W7 124 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 OR5A1Q8NGJ0 315 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 PSMG3-AS1Q96PY0 264 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 ORM1P02763 201 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 CTSGP08311 255 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 BMI1P35226 326 aa12.66□□□□□ -0.38
COL6A1-206ENST00000498614 SMIM13P0DJ93 91 aa12.65□□□□□ -0.38
COL6A1-206ENST00000498614 FABP2P12104 132 aa12.65□□□□□ -0.38
COL6A1-206ENST00000498614 RPL7P18124 248 aaKnown RBP12.65□□□□□ -0.38
COL6A1-206ENST00000498614 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
COL6A1-206ENST00000498614 ZMAT4Q9H898 229 aa12.65□□□□□ -0.38
COL6A1-206ENST00000498614 FBLL1A6NHQ2 334 aaKnown RBP12.65□□□□□ -0.38
COL6A1-206ENST00000498614 TMEM238C9JI98 176 aa12.65□□□□□ -0.38
COL6A1-206ENST00000498614 GATA1P15976 413 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-206ENST00000498614 ECSCRQ19T08 205 aa12.65□□□□□ -0.38
COL6A1-206ENST00000498614 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
COL6A1-206ENST00000498614 K7ERJ3 54 aa12.64□□□□□ -0.39
COL6A1-206ENST00000498614 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
COL6A1-206ENST00000498614 FCER1GP30273 86 aa12.64□□□□□ -0.39
COL6A1-206ENST00000498614 PIFOQ8TCI5 191 aa12.64□□□□□ -0.39
COL6A1-206ENST00000498614 PRSS1P07477 247 aa12.64□□□□□ -0.39
COL6A1-206ENST00000498614 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
COL6A1-206ENST00000498614 GCN1Q92616 2671 aaKnown RBP12.64□□□□□ -0.39
COL6A1-206ENST00000498614 J3QKU1 62 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 ERCC8Q13216 396 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 HIGD1BQ9P298 99 aa12.63□□□□□ -0.39
COL6A1-206ENST00000498614 FASNP49327 2511 aaKnown RBP12.62□□□□□ -0.39
COL6A1-206ENST00000498614 SAA4P35542 130 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 C15orf32Q32M92 178 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 FOXC2Q99958 501 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 BPESC1Q9GZL8 116 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 ATP6V0E1O15342 81 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 IGKCP01834 107 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 UBE2E1P51965 193 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 TMEM158Q8WZ71 300 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 NRGNQ92686 78 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
COL6A1-206ENST00000498614 POLQO75417 2590 aa12.62□□□□□ -0.39
COL6A1-206ENST00000498614 FABP5P3A8MUU1 101 aa12.61□□□□□ -0.39
COL6A1-206ENST00000498614 K7EMI3 77 aa12.61□□□□□ -0.39
COL6A1-206ENST00000498614 SCGB2A1O75556 95 aa12.61□□□□□ -0.39
COL6A1-206ENST00000498614 EFNA4P52798 201 aa12.61□□□□□ -0.39
COL6A1-206ENST00000498614 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
COL6A1-206ENST00000498614 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
COL6A1-206ENST00000498614 TRBV25-1A0A075B6N4 114 aa12.61□□□□□ -0.39
COL6A1-206ENST00000498614 PHLDA1Q8WV24 401 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-206ENST00000498614 ZFHX3Q15911 3703 aa12.6□□□□□ -0.39
COL6A1-206ENST00000498614 FAM110DQ8TAY7 271 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-206ENST00000498614 LINC01548A6NM66 108 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 G3V318 75 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 LMO4P61968 165 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 ZC2HC1BQ5TFG8 222 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 ABCA12Q86UK0 2595 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 DPM2O94777 84 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 CLEC3BP05452 202 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms