RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 WI2-2373I1.2A0A1W2PRP0 233 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 F5H768 121 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 CRIP2P52943 208 aaPredicted RBP9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 HIGD1AQ9Y241 93 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 IGHV1-69DA0A0B4J2H0 117 aa9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 IGHV1-69P01742 117 aa9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 FAM110DQ8TAY7 271 aaPredicted RBP9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 RASL11BQ9BPW5 248 aa9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 P01737 135 aa9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 MS4A6AQ9H2W1 248 aa9.01□□□□□ -0.97
SNRNP200-208ENST00000497539 CIARTQ8N365 385 aaPredicted RBP9□□□□□ -0.97
SNRNP200-208ENST00000497539 F8W735 103 aaPredicted RBP9□□□□□ -0.97
SNRNP200-208ENST00000497539 H3BRN7 92 aa9□□□□□ -0.97
SNRNP200-208ENST00000497539 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
SNRNP200-208ENST00000497539 SRD5A1P18405 259 aa9□□□□□ -0.97
SNRNP200-208ENST00000497539 XGP55808 180 aa9□□□□□ -0.97
SNRNP200-208ENST00000497539 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
SNRNP200-208ENST00000497539 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
SNRNP200-208ENST00000497539 KLF12Q9Y4X4 402 aa9□□□□□ -0.97
SNRNP200-208ENST00000497539 NCBP2LA6PVI3 153 aaKnown RBP8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 ARHGAP32A7KAX9 2087 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 CHEK1O14757 476 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 SLC25A16P16260 332 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 TEX29Q8N6K0 151 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 SLC25A39Q9BZJ4 359 aaPredicted RBP8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 A8MWL6 223 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 EVI2AP22794 236 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 KIR3DS1Q14943 382 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 C19orf54Q5BKX5 351 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 LRRC75A-AS1Q8N1F1 130 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
SNRNP200-208ENST00000497539 IGHV4-30-2A0A087WSY4 118 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 TRBV6-1A0A0K0K1D8 114 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 WFDC2Q14508 124 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 ATP5L2Q7Z4Y8 100 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 C5orf56Q8N8D9 126 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 ZNF491Q8N8L2 437 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 RHODO00212 210 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 KIR2DL5BQ8NHK3 375 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 A0A096LNT2 108 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 MRPS12O15235 138 aaKnown RBP8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 MSMBP08118 114 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 PRNTQ86SH4 94 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 EXOC3-AS1Q8N2X6 119 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 PRSS22Q9GZN4 317 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 Q9H3A6 140 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 OTORQ9NRC9 128 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 C21orf62Q9NYP8 219 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 MOB4Q9Y3A3 225 aa8.98□□□□□ -0.97
SNRNP200-208ENST00000497539 NCR2O95944 276 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 COX6B1P14854 86 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 COL8A1P27658 744 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 NDUFV3P56181 108 aaKnown RBP8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 FXYD7P58549 80 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 RBPMS2Q6ZRY4 209 aaKnown RBP8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 LYPD1Q8N2G4 141 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 SYT8Q8NBV8 401 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 ZNF502Q8TBZ5 544 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 PIFOQ8TCI5 191 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 RNF125Q96EQ8 232 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 DOPEY1Q5JWR5 2465 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 DCHS2Q6V1P9 2916 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 IGSF10Q6WRI0 2623 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 TCRAP04437 139 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 LYZP61626 148 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 FAM106AQ4KMX7 169 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 SAMD5Q5TGI4 173 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 ATP6V0E2Q8NHE4 81 aa8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 CHCHD1Q96BP2 118 aaKnown RBP8.97□□□□□ -0.97
SNRNP200-208ENST00000497539 PRB1P04280 392 aa8.96□□□□□ -0.97
SNRNP200-208ENST00000497539 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.97
SNRNP200-208ENST00000497539 B4DSR2 109 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 LTAP01374 205 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 ETDBQ3ZM63 59 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 FMC1Q96HJ9 113 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 ZNF414Q96IQ9 312 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 ZNF580Q9UK33 172 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 NBASA2RRP1 2371 aa8.96□□□□□ -0.98
SNRNP200-208ENST00000497539 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 APOHP02749 345 aaPredicted RBP8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 ARMS2P0C7Q2 107 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 COX8AP10176 69 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 SEC61GP60059 68 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 KLF17Q5JT82 389 aaPredicted RBP8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 BPIFA4PQ86YQ2 179 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 MAP1LC3AQ9H492 121 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 RELNP78509 3460 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 CACNA1BQ00975 2339 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 J3QLI3 93 aa8.95□□□□□ -0.98
SNRNP200-208ENST00000497539 ATP6V0E1O15342 81 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms