RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 OR51H1Q8NH63 302 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 ZNF488Q96MN9 340 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 C16orf95Q9H693 158 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.18□□□□□ -1.58
HOXA9-206ENST00000497089 MTCH1Q9NZJ7 389 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 HIGD1BQ9P298 99 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 VPREB3Q9UKI3 123 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 ANK2Q01484 3957 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 WNK1Q9H4A3 2382 aa5.18□□□□□ -1.58
HOXA9-206ENST00000497089 IGHV1-24A0A0C4DH33 117 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 C17orf98A8MV24 154 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 IGKV1-5P01602 117 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 DLX6P56179 175 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 PROK1P58294 105 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 OR9G1Q8NH87 305 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 LINC01006Q8NI28 216 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 RNF183Q96D59 192 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 SPAG8Q99932 426 aaPredicted RBP5.17□□□□□ -1.58
HOXA9-206ENST00000497089 C1QTNF4Q9BXJ3 329 aa5.17□□□□□ -1.58
HOXA9-206ENST00000497089 TECRQ9NZ01 308 aaKnown RBP5.17□□□□□ -1.58
HOXA9-206ENST00000497089 IGKV1D-13A0A0B4J2D9 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 PMS2P5A8MQ11 134 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 IGKV1-13P0DP09 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 FGF6P10767 208 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 CSN1S1P47710 185 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 MFAP2P55001 183 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 DLX1P56177 255 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 RPL32P62910 135 aaKnown RBP5.16□□□□□ -1.58
HOXA9-206ENST00000497089 ZNF146Q15072 292 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 PIGYQ3MUY2 71 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 ZFAND6Q6FIF0 208 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 Q6ZSV7 163 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 Q8IYB0 196 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 OR11H6Q8NGC7 330 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GTSF1Q8WW33 167 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 CYYR1Q96J86 154 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 HINT2Q9BX68 163 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 UFC1Q9Y3C8 167 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 LINC00312Q9Y6C7 94 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 MEGF8Q7Z7M0 2845 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 A0A1W2PRE2 83 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GAGE12JA6NER3 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 ODF3BA8MYP8 253 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 TMEM262E9PQX1 116 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 SPINK4O60575 86 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GAGE7O76087 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GAGE12FP0CL80 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GAGE12GP0CL81 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GAGE12IP0CL82 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 CCL3L1P16619 93 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 KRTAP10-3P60369 221 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 HBBP68871 147 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 PRB3Q04118 309 aaPredicted RBP5.16□□□□□ -1.58
HOXA9-206ENST00000497089 GAGE4Q13068 117 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 CATR1Q13166 79 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 LGALS9BQ3B8N2 356 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 C5orf47Q569G3 176 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 LGALS9CQ6DKI2 356 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 PQLC2Q6ZP29 291 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 MKXQ8IYA7 352 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 PIFOQ8TCI5 191 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 RAB37Q96AX2 223 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 SRSF8Q9BRL6 282 aaKnown RBP5.16□□□□□ -1.58
HOXA9-206ENST00000497089 TMEM126AQ9H061 195 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 OR1A1Q9P1Q5 309 aa5.16□□□□□ -1.58
HOXA9-206ENST00000497089 NOTCH1P46531 2555 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 SH2D7A6NKC9 451 aaPredicted RBP5.15□□□□□ -1.59
HOXA9-206ENST00000497089 E9PLD3 99 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 H3BMG7 143 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 TIMM23O14925 209 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 CNIH1O95406 144 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 IGKV1-39P01597 117 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 IGKV1D-39P04432 117 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 SCTP09683 121 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 FRMD6-AS1P0C7T7 363 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 HLA-DRB4P13762 266 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 G6PCP35575 357 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 MFAP4P55083 255 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 EDDM3BP56851 147 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 RPL8P62917 257 aaKnown RBP5.15□□□□□ -1.59
HOXA9-206ENST00000497089 TAL2Q16559 108 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 LYRM7Q5U5X0 104 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.15□□□□□ -1.59
HOXA9-206ENST00000497089 RITA1Q96K30 269 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 NDFIP1Q9BT67 221 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 TMEM133Q9H2Q1 129 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 SPANXCQ9NY87 97 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 HILPDAQ9Y5L2 63 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 HLA-DRB4X5D2U9 266 aa5.15□□□□□ -1.59
HOXA9-206ENST00000497089 VWFP04275 2813 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 IGKV1-12A0A0C4DH73 117 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 FNDC10F2Z333 226 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 H3BUX3 64 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 APOMO95445 188 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 IGKV1D-12P01611 117 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 IGHV1-8P0DP01 117 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 BCL3P20749 454 aa5.14□□□□□ -1.59
HOXA9-206ENST00000497089 FCGR2BP31994 310 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms