RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LINC00527Q9UJ94 153 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 SPG11Q96JI7 2443 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 TRAV26-2A0A0B4J265 109 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 A1L4Q6 167 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 OR1N2Q8NGR9 330 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 JMJD8Q96S16 334 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 TRAV8-2A0A0B4J237 113 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 FBLL1A6NHQ2 334 aaKnown RBP10□□□□□ -0.81
PTPN7-217ENST00000495688 CDKN1BP46527 198 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 SEC11AP67812 179 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 LINC01559Q495D7 138 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 RAB37Q96AX2 223 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 ABCA2Q9BZC7 2435 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 TMEM219Q86XT9 240 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 GOSR1O95249 250 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 TMEM158Q8WZ71 300 aa10□□□□□ -0.81
PTPN7-217ENST00000495688 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 H3BUT2 72 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 SPRY2O43597 315 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 PRSS1P07477 247 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 COTL1Q14019 142 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 KIR3DS1Q14943 382 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 ODF1Q14990 250 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 HHLA3Q9XRX5 114 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 J3KRW8 73 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 PPBPP02775 128 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 UBE2E1P51965 193 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 KLRB1Q12918 225 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 UBTD1Q9HAC8 227 aa9.99□□□□□ -0.81
PTPN7-217ENST00000495688 FCER1GP30273 86 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 SRSF2Q01130 221 aaKnown RBP9.98□□□□□ -0.81
PTPN7-217ENST00000495688 BPESC1Q9GZL8 116 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 UFC1Q9Y3C8 167 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 IGF1P05019 195 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 CLEC2AQ6UVW9 174 aa9.98□□□□□ -0.81
PTPN7-217ENST00000495688 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 DEFB1P60022 68 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 HSD52Q0P140 79 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 TMEM78Q5T7P6 136 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 OR9G4Q8NGQ1 327 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 FOXC2Q99958 501 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
PTPN7-217ENST00000495688 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 C9orf118A6NHY6 69 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 PRR9Q5T870 116 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 SLC50A1Q9BRV3 221 aa9.97□□□□□ -0.81
PTPN7-217ENST00000495688 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
PTPN7-217ENST00000495688 IGLV2-18A0A075B6J9 118 aa9.96□□□□□ -0.81
PTPN7-217ENST00000495688 GTSCR1Q86UQ5 136 aa9.96□□□□□ -0.81
PTPN7-217ENST00000495688 A6NDN8 102 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 LINC01546A6NGU7 62 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 H3BRM9 83 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 K7EMI3 77 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 RAB9AP51151 201 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 LMO4P61968 165 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 OR2K2Q8NGT1 345 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 METTL26Q96S19 204 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 FLNCQ14315 2725 aa9.96□□□□□ -0.82
PTPN7-217ENST00000495688 A0A0G2JLM5 398 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 SAP30O75446 220 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 EEF1AKMT3Q96AZ1 226 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 VPS25Q9BRG1 176 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.823e-6■■□□□ 11.8
PTPN7-217ENST00000495688 H3BVH4 76 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 S100A7P31151 101 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 UFSP1Q6NVU6 142 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 Q8N8P6 123 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 NRACQ8N912 160 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
PTPN7-217ENST00000495688 TMEM8BA6NDV4 472 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 NPFFO15130 113 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 SIVA1O15304 175 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 TRBV12-3P01733 135 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 IGKCP01834 107 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 EFNA4P52798 201 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 FXYD2P54710 66 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 ZC2HC1BQ5TFG8 222 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 C5orf56Q8N8D9 126 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 OR4X2Q8NGF9 303 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 C20orf173Q96LM9 149 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 TMEM160Q9NX00 188 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 GCSHP23434 173 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 C16orf92Q96LL3 132 aa9.94□□□□□ -0.82
PTPN7-217ENST00000495688 UNQ9165/PRO28630Q6UXU0 137 aa9.93□□□□□ -0.82
PTPN7-217ENST00000495688 BRD3OSQ6XYD6 125 aa9.93□□□□□ -0.82
PTPN7-217ENST00000495688 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
PTPN7-217ENST00000495688 AGRNO00468 2067 aa9.93□□□□□ -0.82
PTPN7-217ENST00000495688 KLK9Q2XQG4 91 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms