RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	AGPAT4-IT1	Q9H0P7	198 aa		10.38	□□□□□ -0.75
SUPT20H-222	ENST00000495071	MSRB2	Q9Y3D2	182 aa		10.38	□□□□□ -0.75
SUPT20H-222	ENST00000495071	TRAV26-2	A0A0B4J265	109 aa		10.38	□□□□□ -0.75
SUPT20H-222	ENST00000495071	ADAMTSL5	Q6ZMM2	481 aa		10.38	□□□□□ -0.75
SUPT20H-222	ENST00000495071		Q8N6K4	173 aa		10.38	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SVEP1	Q4LDE5	3571 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SMIM13	P0DJ93	91 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	LINC01559	Q495D7	138 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	ZC2HC1B	Q5TFG8	222 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	HIF1AN	Q9NWT6	349 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	DPM2	O94777	84 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	TRGV3	P03979	118 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	PAX8	Q06710	450 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	ODF1	Q14990	250 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	FBXL19-AS1	Q494R0	122 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	IGKV2D-26	A0A0A0MRZ7	120 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071		K7EP34	96 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SMIM17	P0DL12	118 aa		10.37	□□□□□ -0.75
SUPT20H-222	ENST00000495071	IGKV3D-20	A0A0C4DH25	116 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	EEF1AKMT3	Q96AZ1	226 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	C16orf92	Q96LL3	132 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	TMEM8B	A6NDV4	472 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	C1orf122	Q6ZSJ8	110 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SPTAN1	Q13813	2472 aa	Known RBP	10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	ATP5L	O75964	103 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SAA4	P35542	130 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071		Q8N8P6	123 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	CHAC1	Q9BUX1	264 aa		10.36	□□□□□ -0.75
SUPT20H-222	ENST00000495071	RIPPLY3	P57055	190 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	KLK15	Q9H2R5	256 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	ZFAND3	Q9H8U3	227 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	LINC00527	Q9UJ94	153 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	TRAV40	A0A0B4J280	105 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071		A0A1W2PPM0	123 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SRSF2	Q01130	221 aa	Known RBP	10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	EBI3	Q14213	229 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	SAMD5	Q5TGI4	173 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	CNFN	Q9BYD5	112 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	C11orf21	Q9P2W6	132 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	RELN	P78509	3460 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071		H3BVH4	76 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	C8orf86	Q6ZUL3	223 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	UBTD1	Q9HAC8	227 aa		10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	NHP2	Q9NX24	153 aa	Known RBP	10.35	□□□□□ -0.75
SUPT20H-222	ENST00000495071	BSN	Q9UPA5	3926 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	LINC01548	A6NM66	108 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	S100A4	P26447	101 aa	Known RBP	10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	ADORA2A-AS1	P86434	159 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071		K7ERJ3	54 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	FXYD2	P54710	66 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	RPL11	P62913	178 aa	Known RBP	10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	RPL24	P83731	157 aa	Known RBP	10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	LAGE3	Q14657	143 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	MRPL35	Q9NZE8	188 aa	Known RBP	10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	RBAKDN	A6NC62	111 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	PSMG4	Q5JS54	123 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	CCDC140	Q96MF4	163 aa		10.34	□□□□□ -0.75
SUPT20H-222	ENST00000495071	DCHS2	Q6V1P9	2916 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	ATP5G2	Q06055	141 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	UFSP1	Q6NVU6	142 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	TMEM219	Q86XT9	240 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	SMPX	Q9UHP9	88 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	IGHV3OR16-10	A0A075B7F0	116 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071		M0R381	172 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	C11orf71	Q6IPW1	123 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	ZNF575	Q86XF7	245 aa		10.33	□□□□□ -0.76
SUPT20H-222	ENST00000495071	UBE2E1	P51965	193 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	EFNA4	P52798	201 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071		Q6ZQT7	251 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	OR5A1	Q8NGJ0	315 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	SIRPD	Q9H106	197 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	HHLA3	Q9XRX5	114 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	IGKV3-7	A0A075B6H7	116 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	TRBV25-1	A0A075B6N4	114 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071		K7EMI3	77 aa		10.32	□□□□□ -0.76
SUPT20H-222	ENST00000495071	CLPSL1	A2RUU4	121 aa		10.31	□□□□□ -0.76
SUPT20H-222	ENST00000495071	SPRY2	O43597	315 aa		10.31	□□□□□ -0.76
SUPT20H-222	ENST00000495071	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
SUPT20H-222	ENST00000495071	NBL1	P41271	181 aa		10.31	□□□□□ -0.76
SUPT20H-222	ENST00000495071	TRBV7-1	A0A0A6YYK4	115 aa		10.31	□□□□□ -0.76
SUPT20H-222	ENST00000495071	TRAV8-2	A0A0B4J237	113 aa		10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	KLRB1	Q12918	225 aa		10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	NPFFR1	Q9GZQ6	430 aa		10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	MGP	P08493	103 aa		10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	SCGB2A2	Q13296	93 aa		10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	HIST1H4G	Q99525	98 aa		10.3	□□□□□ -0.76
SUPT20H-222	ENST00000495071	BPESC1	Q9GZL8	116 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	ZMAT4	Q9H898	229 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	HIGD1B	Q9P298	99 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	RAX	Q9Y2V3	346 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	IGHV7-4-1	A0A0J9YVY3	117 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	CENPVL3	A0A0U1RRI6	287 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	NPFF	O15130	113 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	OR10J6P	Q8NGY7	276 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	SCGB3A1	Q96QR1	104 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	CSTL1	Q9H114	145 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	PHLDA3	Q9Y5J5	127 aa		10.29	□□□□□ -0.76
SUPT20H-222	ENST00000495071	ARL3	P36405	182 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms