RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 KCNIP2Q9NS61 270 aa15.06■□□□□ 0
HDDC3-203ENST00000494993 PGPEP1Q9NXJ5 209 aa15.06■□□□□ 0
HDDC3-203ENST00000494993 EREGO14944 169 aa15.05■□□□□ -0
HDDC3-203ENST00000494993 PRAF2O60831 178 aa15.05■□□□□ -0
HDDC3-203ENST00000494993 MZT2BQ6NZ67 158 aa15.05■□□□□ -0
HDDC3-203ENST00000494993 NDUFA13Q9P0J0 144 aa15.05■□□□□ -0
HDDC3-203ENST00000494993 TNFRSF18Q9Y5U5 241 aa15.05■□□□□ -0
HDDC3-203ENST00000494993 RBAKDNA6NC62 111 aa15.04■□□□□ -0
HDDC3-203ENST00000494993 E5RGE8 158 aa15.04■□□□□ -0
HDDC3-203ENST00000494993 NEGR1Q7Z3B1 354 aa15.04■□□□□ -0
HDDC3-203ENST00000494993 WDR61Q9GZS3 305 aaKnown RBP15.04■□□□□ -0
HDDC3-203ENST00000494993 OR5AC2Q9NZP5 309 aa15.04■□□□□ -0
HDDC3-203ENST00000494993 TRGV4A0A0C4DH28 118 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 SIX6O95475 246 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 FUSP35637 526 aaKnown RBP eCLIP15.03■□□□□ -0
HDDC3-203ENST00000494993 CSN1S1P47710 185 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 ZNF266Q14584 549 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 MUC21Q5SSG8 566 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 CDPF1Q6NVV7 123 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 NFE4Q86UQ8 179 aa15.03■□□□□ -0
HDDC3-203ENST00000494993 OR7C2O60412 319 aa15.02■□□□□ -0
HDDC3-203ENST00000494993 LRRC37A5PQ49AS3 106 aa15.02■□□□□ -0
HDDC3-203ENST00000494993 LYPD1Q8N2G4 141 aa15.02■□□□□ -0
HDDC3-203ENST00000494993 NMES1Q9C002 83 aa15.02■□□□□ -0
HDDC3-203ENST00000494993 PTTG2Q9NZH5 202 aa15.02■□□□□ -0
HDDC3-203ENST00000494993 MDFICQ9P1T7 246 aa15.02■□□□□ -0
HDDC3-203ENST00000494993 EPM2AB3EWF7 344 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 C17orf112F2Z3M2 114 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 H0YIZ8 118 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 SFTA3P0C7M3 94 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 RANP62826 216 aaKnown RBP15.01□□□□□ -0.01
HDDC3-203ENST00000494993 ASAH1Q13510 395 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 IQCF2Q8IXL9 164 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 OR10G4Q8NGN3 311 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 LY96Q9Y6Y9 160 aa15.01□□□□□ -0.01
HDDC3-203ENST00000494993 TRAV9-2A0A087WT02 112 aa15□□□□□ -0.01
HDDC3-203ENST00000494993 K7EQD1 137 aa15□□□□□ -0.01
HDDC3-203ENST00000494993 SRIP30626 198 aa15□□□□□ -0.01
HDDC3-203ENST00000494993 Q6AWC8 147 aa15□□□□□ -0.01
HDDC3-203ENST00000494993 ZNF479Q96JC4 524 aa15□□□□□ -0.01
HDDC3-203ENST00000494993 DNAH10OSP0CZ25 163 aa14.99□□□□□ -0.01
HDDC3-203ENST00000494993 UBE2L3P68036 154 aaKnown RBP14.99□□□□□ -0.01
HDDC3-203ENST00000494993 TMEM183BQ1AE95 376 aa14.99□□□□□ -0.01
HDDC3-203ENST00000494993 TMEM183AQ8IXX5 376 aa14.99□□□□□ -0.01
HDDC3-203ENST00000494993 RASL10AQ92737 203 aa14.99□□□□□ -0.01
HDDC3-203ENST00000494993 SPXQ9BT56 116 aa14.99□□□□□ -0.01
HDDC3-203ENST00000494993 LENEPQ9Y5L5 61 aa14.99□□□□□ -0.01
HDDC3-203ENST00000494993 A0A087WTM6 91 aa14.98□□□□□ -0.01
HDDC3-203ENST00000494993 FAM159AQ6UWV7 190 aa14.98□□□□□ -0.01
HDDC3-203ENST00000494993 WFDC10BQ8IUB3 73 aa14.98□□□□□ -0.01
HDDC3-203ENST00000494993 PCNPQ8WW12 178 aaKnown RBP14.98□□□□□ -0.01
HDDC3-203ENST00000494993 TRGV11A0A075B6L2 103 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 DIRC3C9JPN6 131 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 K7EP13 123 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 ORM1P02763 201 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 GYPEP15421 78 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 XGP55808 180 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 CYCSP99999 105 aaKnown RBP14.97□□□□□ -0.01
HDDC3-203ENST00000494993 ENKURQ8TC29 256 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 ATP5SQ99766 215 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 MSRB1Q9NZV6 116 aa14.97□□□□□ -0.01
HDDC3-203ENST00000494993 FAT1Q14517 4588 aa14.96□□□□□ -0.01
HDDC3-203ENST00000494993 KHDC3LQ587J8 217 aa14.96□□□□□ -0.01
HDDC3-203ENST00000494993 FFAR4Q5NUL3 377 aa14.96□□□□□ -0.01
HDDC3-203ENST00000494993 LINC00299Q6ZSB3 139 aa14.96□□□□□ -0.01
HDDC3-203ENST00000494993 EVI2AP22794 236 aa14.95□□□□□ -0.02
HDDC3-203ENST00000494993 TMED6Q8WW62 240 aa14.95□□□□□ -0.02
HDDC3-203ENST00000494993 S100ZQ8WXG8 99 aa14.95□□□□□ -0.02
HDDC3-203ENST00000494993 HERC1Q15751 4861 aa14.95□□□□□ -0.02
HDDC3-203ENST00000494993 TRAV4A0A0B4J268 109 aa14.94□□□□□ -0.02
HDDC3-203ENST00000494993 TAS2R45P59539 299 aa14.94□□□□□ -0.02
HDDC3-203ENST00000494993 TDRG1Q3Y452 100 aa14.94□□□□□ -0.02
HDDC3-203ENST00000494993 TXNDC17Q9BRA2 123 aa14.94□□□□□ -0.02
HDDC3-203ENST00000494993 NAGKQ9UJ70 344 aa14.94□□□□□ -0.02
HDDC3-203ENST00000494993 C9JCJ5 164 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 IFNA5P01569 189 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 KRTAP10-1P60331 282 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 PPP1R1CQ8WVI7 109 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 HYLS1Q96M11 299 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 HSPB11Q9Y547 144 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 VPS13BQ7Z7G8 4022 aa14.93□□□□□ -0.02
HDDC3-203ENST00000494993 H2BFSP57053 126 aa14.92□□□□□ -0.02
HDDC3-203ENST00000494993 OR4C5Q8NGB2 326 aa14.92□□□□□ -0.02
HDDC3-203ENST00000494993 OTORQ9NRC9 128 aa14.92□□□□□ -0.02
HDDC3-203ENST00000494993 RPH3ALQ9UNE2 315 aa14.92□□□□□ -0.02
HDDC3-203ENST00000494993 PGPA6NDG6 321 aa14.91□□□□□ -0.02
HDDC3-203ENST00000494993 M0R2P5 195 aa14.91□□□□□ -0.02
HDDC3-203ENST00000494993 C10orf126Q8N4M7 172 aa14.91□□□□□ -0.02
HDDC3-203ENST00000494993 CMTM2Q8TAZ6 248 aa14.91□□□□□ -0.02
HDDC3-203ENST00000494993 IGHV3-16A0A0C4DH30 117 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 INMT-MINDY4F8WBC2 141 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 GNRH2O43555 120 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 EIF3GO75821 320 aaKnown RBP eCLIP14.9□□□□□ -0.02
HDDC3-203ENST00000494993 UPK1BO75841 260 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 CRYGDP07320 174 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 INAFM2P0DMQ5 153 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 FAM74A1Q5RGS3 127 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 SCGB1C1Q8TD33 95 aa14.9□□□□□ -0.02
HDDC3-203ENST00000494993 TRAV21A0A0B4J279 112 aa14.89□□□□□ -0.03
HDDC3-203ENST00000494993 LOC100131303A0A0U1RQF7 123 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms