RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	SNRPD3	P62318	126 aa	Known RBP	0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	HSD17B12	Q53GQ0	312 aa		0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	LPAR5	Q9H1C0	372 aa		0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	XIRP1	Q702N8	1843 aa	Known RBP	0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826		A0A1W2PPB8	328 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826		A0A1W2PRS3	328 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	KIR3DP1	A8MWS1	328 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	CDC42EP2	O14613	210 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	UQCRQ	O14949	82 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	SLC25A5	P05141	298 aa	Known RBP	0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	DNAJB13	P59910	316 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	RPS28	P62857	69 aa	Known RBP	0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	CCDC153	Q494R4	210 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	LINC00575	Q6W349	94 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	SBSPON	Q8IVN8	264 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	TCTEX1D1	Q8N7M0	179 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	OR8J3	Q8NGG0	315 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	NAT14	Q8WUY8	206 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	BATF3	Q9NR55	127 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	C19orf12	Q9NSK7	152 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	MPC1	Q9Y5U8	109 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	ANK1	P16157	1881 aa		0.96	□□□□□ -2.26
GCFC2-210	ENST00000492826	KIAA1549L	Q6ZVL6	1849 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	IGHV1-24	A0A0C4DH33	117 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826		A0A0J9YY99	117 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826		A0A1W2PPM0	123 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	ZNF727	A8MUV8	499 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	IL7	P13232	177 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	QRFP	P83859	136 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	IQCJ	Q1A5X6	159 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	CSAG1	Q6PB30	78 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826		Q6ZQY7	126 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	TCTE3	Q8IZS6	198 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	OTOS	Q8NHW6	89 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	SPANXA1	Q9NS26	97 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	TET1	Q8NFU7	2136 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	MYH1	P12882	1939 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	MED23	Q9ULK4	1368 aa		0.95	□□□□□ -2.26
GCFC2-210	ENST00000492826	CIT	O14578	2027 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	TRBV30	A0A0K0K1B3	111 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826		A0A1B0GX51	115 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	TMEM189	A5PLL7	270 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	IFITM5	A6NNB3	132 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826		C9JAW5	83 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	TNFSF15	O95150	251 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	HIST1H1B	P16401	226 aa	Known RBP	0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	PDE6G	P18545	87 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	PRB3	Q04118	309 aa	Predicted RBP	0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	TMEM244	Q5VVB8	128 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	IZUMO2	Q6UXV1	221 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	LZIC	Q8WZA0	190 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	ANP32B	Q92688	251 aa	Known RBP	0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	BANF2	Q9H503	90 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	HIGD1A	Q9Y241	93 aa		0.94	□□□□□ -2.26
GCFC2-210	ENST00000492826	TRPM7	Q96QT4	1865 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826	KDM5C	P41229	1560 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826		A0A1B0GW64	132 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826	SMIM24	O75264	130 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826	ZGRF1	Q86YA3	2104 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826	SPANXC	Q9NY87	97 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826	COMMD3	Q9UBI1	195 aa		0.93	□□□□□ -2.26
GCFC2-210	ENST00000492826	PNMA8C	A0A1B0GUJ8	204 aa		0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	OR2H2	O95918	312 aa		0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	IGKC	P01834	107 aa		0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	PRB4	P10163	310 aa	Predicted RBP	0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	SCGB1A1	P11684	91 aa		0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	IDO2	Q6ZQW0	420 aa		0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	JPT1	Q9UK76	154 aa		0.92	□□□□□ -2.26
GCFC2-210	ENST00000492826	BORCS7-ASMT	A0A0B4J1R7	106 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	TMEM30CP	A0ZSE6	113 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	GYPB	P06028	91 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	DBI	P07108	87 aa	Known RBP	0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	SCT	P09683	121 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	CCL4	P13236	92 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	CCSMST1	Q4G0I0	132 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826		Q5XG85	94 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	UNQ5815/PRO19632	Q6UWF5	114 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	C10orf111	Q8N326	155 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	CCL19	Q99731	98 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	MRPL36	Q9P0J6	103 aa	Known RBP	0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	GSKIP	Q9P0R6	139 aa		0.91	□□□□□ -2.26
GCFC2-210	ENST00000492826	TRAV17	A0A0B4J275	112 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	TPST1	O60507	370 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	IGHV3-30	P01768	117 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	IGHV3-30-5	P0DP03	117 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	KDELR1	P24390	212 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	SLC35B3	Q9H1N7	401 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	METTL1	Q9UBP6	276 aa	Known RBP	0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	CNTRL	Q7Z7A1	2325 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	MED12	Q93074	2177 aa		0.9	□□□□□ -2.27
GCFC2-210	ENST00000492826	MUC4	Q99102	2169 aa		0.89	□□□□□ -2.27
GCFC2-210	ENST00000492826	ADCYAP1	P18509	176 aa		0.89	□□□□□ -2.27
GCFC2-210	ENST00000492826	SPINT3	P49223	89 aa		0.89	□□□□□ -2.27
GCFC2-210	ENST00000492826	LYPD5	Q6UWN5	251 aa		0.89	□□□□□ -2.27
GCFC2-210	ENST00000492826	MAGOHB	Q96A72	148 aa	Known RBP	0.89	□□□□□ -2.27
GCFC2-210	ENST00000492826	ASCC3	Q8N3C0	2202 aa	Known RBP	0.89	□□□□□ -2.27
GCFC2-210	ENST00000492826	ARHGEF10	O15013	1369 aa		0.88	□□□□□ -2.27
GCFC2-210	ENST00000492826		A0A0G2JMM0	328 aa		0.88	□□□□□ -2.27
GCFC2-210	ENST00000492826	ARPC5	O15511	151 aa		0.88	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms