RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 METTL26Q96S19 204 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 WNK1Q9H4A3 2382 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 A1L4Q6 167 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 NPSP0C0P6 89 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 ARL3P36405 182 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 PRR9Q5T870 116 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 LAMTOR2Q9Y2Q5 125 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 F6UB75 175 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 PF4V1P10720 104 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
HMGN1-220ENST00000492280 SAPCD1Q5SSQ6 148 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 CLEC2AQ6UVW9 174 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 GLMPQ8WWB7 406 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 CKS2P33552 79 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-220ENST00000492280 APCP25054 2843 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 NIPBLQ6KC79 2804 aaeCLIP9.53□□□□□ -0.88
HMGN1-220ENST00000492280 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 WFDC12Q8WWY7 111 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 C18orf15Q96N68 181 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 HIF1ANQ9NWT6 349 aa9.53□□□□□ -0.88
HMGN1-220ENST00000492280 ACANP16112 2415 aa9.52□□□□□ -0.88
HMGN1-220ENST00000492280 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
HMGN1-220ENST00000492280 C16orf92Q96LL3 132 aa9.52□□□□□ -0.89
HMGN1-220ENST00000492280 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
HMGN1-220ENST00000492280 ORMDL3Q8N138 153 aa9.52□□□□□ -0.89
HMGN1-220ENST00000492280 MTORP42345 2549 aa9.52□□□□□ -0.89
HMGN1-220ENST00000492280 KLHDC1Q8N7A1 406 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 CHD6Q8TD26 2715 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 AKAP9Q99996 3911 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 TRBV7-1A0A0A6YYK4 115 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 Q6AWC8 147 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 ZNF493Q6ZR52 646 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 ZNF747Q9BV97 191 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 UFC1Q9Y3C8 167 aa9.51□□□□□ -0.89
HMGN1-220ENST00000492280 TMEM78Q5T7P6 136 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 GPHB5Q86YW7 130 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 RNF185Q96GF1 192 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 ITPR3Q14573 2671 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-220ENST00000492280 BMI1P35226 326 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 C19orf54Q5BKX5 351 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 HIST2H2BDQ6DRA6 164 aa9.5□□□□□ -0.89
HMGN1-220ENST00000492280 FLNAP21333 2647 aaKnown RBP9.5□□□□□ -0.89
HMGN1-220ENST00000492280 A0A087X0K7 114 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 H3BVH4 76 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 MSMBP08118 114 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 CACNG7P62955 275 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 DEFB104AQ8WTQ1 72 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 M0QZK8 103 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 MPV17L2Q567V2 206 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 TMEM191AQ9H0A3 160 aa9.49□□□□□ -0.89
HMGN1-220ENST00000492280 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 BBC3Q96PG8 261 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-220ENST00000492280 SPOCK3Q9BQ16 436 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 SLC50A1Q9BRV3 221 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 HSPB8Q9UJY1 196 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 C20orf202A1L168 122 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 IGHV4-59P01825 116 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 COL5A1-AS1Q5SY13 56 aa9.48□□□□□ -0.89
HMGN1-220ENST00000492280 OR4X2Q8NGF9 303 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 PRRC2AP48634 2157 aaKnown RBP9.47□□□□□ -0.89
HMGN1-220ENST00000492280 A0A1B0GW15 77 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 COX8CQ7Z4L0 72 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 TENM4Q6N022 2769 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 DLEU1O43261 78 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
HMGN1-220ENST00000492280 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 DUX5Q96PT3 197 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 MUC4Q99102 2169 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 U3KQE9 123 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 U3KQK5 164 aa9.47□□□□□ -0.89
HMGN1-220ENST00000492280 JMJD1CQ15652 2540 aa9.46□□□□□ -0.89
HMGN1-220ENST00000492280 IGHV7-4-1A0A0J9YVY3 117 aa9.46□□□□□ -0.89
HMGN1-220ENST00000492280 A6NDX4 124 aa9.46□□□□□ -0.89
HMGN1-220ENST00000492280 HSBP1L1C9JCN9 74 aa9.46□□□□□ -0.89
HMGN1-220ENST00000492280 PET117Q6UWS5 81 aa9.46□□□□□ -0.89
HMGN1-220ENST00000492280 FAM223BA6NKX1 122 aa9.46□□□□□ -0.9
HMGN1-220ENST00000492280 M0R381 172 aa9.46□□□□□ -0.9
HMGN1-220ENST00000492280 IGHG2P01859 326 aa9.46□□□□□ -0.9
HMGN1-220ENST00000492280 FAM223AQ8IWN6 122 aa9.46□□□□□ -0.9
HMGN1-220ENST00000492280 MEGF9Q9H1U4 602 aa9.46□□□□□ -0.9
HMGN1-220ENST00000492280 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
HMGN1-220ENST00000492280 TNFRSF6BO95407 300 aa9.45□□□□□ -0.9
HMGN1-220ENST00000492280 NUDT3O95989 172 aa9.45□□□□□ -0.9
HMGN1-220ENST00000492280 RAB9AP51151 201 aa9.45□□□□□ -0.9
HMGN1-220ENST00000492280 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms