RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 GDF5OSQ5U4N7 250 aa9.85□□□□□ -0.83
HLA-DOA-205ENST00000490305 LINC00322Q6ZN03 302 aaPredicted RBP9.85□□□□□ -0.83
HLA-DOA-205ENST00000490305 CLUHP3Q96NS8 147 aa9.85□□□□□ -0.83
HLA-DOA-205ENST00000490305 RPP21Q9H633 154 aaKnown RBP9.85□□□□□ -0.83
HLA-DOA-205ENST00000490305 SORL1Q92673 2214 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 KNCNA6PVL3 124 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 H3BMM0 161 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 WIPF1O43516 503 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 SH2D1AO60880 128 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 PFN1P07737 140 aaKnown RBP9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 CRIP1P50238 77 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 APRG1Q8IVJ8 170 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
HLA-DOA-205ENST00000490305 TRAV21A0A0B4J279 112 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 XKRY2A2RUG3 117 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 A8MWL6 223 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 GPX1P07203 203 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 ZNF80P51504 273 aaPredicted RBP9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 RPS20P60866 119 aaKnown RBP9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 ZFAND2AQ8N6M9 145 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 SPATA3Q8NHX4 192 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 BTF3L4Q96K17 158 aa9.83□□□□□ -0.84
HLA-DOA-205ENST00000490305 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 TMEM189A5PLL7 270 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 KLLNB2CW77 178 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 IGLL1P15814 213 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 CDKN1BP46527 198 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 PRR31Q5SQ13 230 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 GTSCR1Q86UQ5 136 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 STHQ8IWL8 128 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 OR2D3Q8NGH3 330 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 TSKUQ8WUA8 353 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 GFRA4Q9GZZ7 299 aa9.82□□□□□ -0.84
HLA-DOA-205ENST00000490305 SMIM27A0A1W2PRY6 76 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 FAM231BA6NCW3 169 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 AMBPP02760 352 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 CD7P09564 240 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 RNASE4P34096 147 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 RPL19P84098 196 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 ELOBQ15370 118 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 Q6AWC8 147 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 AMTNQ6UX39 209 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 ZMAT5Q9UDW3 170 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 URGCP-MRPS24S4R325 110 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 AGRNO00468 2067 aa9.81□□□□□ -0.84
HLA-DOA-205ENST00000490305 TENM1Q9UKZ4 2725 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 FBN1P35555 2871 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 C7orf71A4D174 169 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 J3KRW8 73 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 ORM1P02763 201 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 ZNF124Q15973 351 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 LINC01559Q495D7 138 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 LURAP1LQ8IV03 231 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 YPEL4Q96NS1 127 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 C19orf73Q9NVV2 129 aa9.8□□□□□ -0.84
HLA-DOA-205ENST00000490305 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
HLA-DOA-205ENST00000490305 NUTF2P61970 127 aaKnown RBP9.79□□□□□ -0.84
HLA-DOA-205ENST00000490305 PRR9Q5T870 116 aa9.79□□□□□ -0.84
HLA-DOA-205ENST00000490305 TRPT1Q86TN4 253 aaKnown RBP9.79□□□□□ -0.84
HLA-DOA-205ENST00000490305 PYGO2Q9BRQ0 406 aa9.79□□□□□ -0.84
HLA-DOA-205ENST00000490305 NAT8BQ9UHF3 227 aa9.79□□□□□ -0.84
HLA-DOA-205ENST00000490305 COLCA2A8K830 154 aa9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 M0R2Z0 102 aa9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 CA1P00915 261 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 CXCL1P09341 107 aa9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 SPINK13Q1W4C9 94 aa9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 NEU1Q99519 415 aa9.78□□□□□ -0.84
HLA-DOA-205ENST00000490305 A0A1W2PPQ1 181 aa9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 RBMY1BA6NDE4 496 aaKnown RBP9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 RBMY1EA6NEQ0 496 aaKnown RBP9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 RBMY1DP0C7P1 496 aaKnown RBP9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
HLA-DOA-205ENST00000490305 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 TRAV12-3A0A0B4J271 114 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 IGKV3D-20A0A0C4DH25 116 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 HIGD1CA8MV81 97 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 ZNF324O75467 553 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 TCL1AP56279 114 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 RIPPLY3P57055 190 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 MORN3Q6PF18 240 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 BORCS7Q96B45 105 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 FAM210BQ96KR6 192 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 MDFIQ99750 246 aa9.76□□□□□ -0.85
HLA-DOA-205ENST00000490305 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 INSP01308 110 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 TYMSP04818 313 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 RAB5AP20339 215 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 FXYD7P58549 80 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 COX19Q49B96 90 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 FAM159AQ6UWV7 190 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
HLA-DOA-205ENST00000490305 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms