RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 C17orf58Q2M2W7 97 aa7.08□□□□□ -1.28
LSAMP-205ENST00000490035 MRPL51Q4U2R6 128 aaKnown RBP7.08□□□□□ -1.28
LSAMP-205ENST00000490035 C3orf56Q8N813 242 aa7.08□□□□□ -1.28
LSAMP-205ENST00000490035 FOXG1P55316 489 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-205ENST00000490035 LY6DQ14210 128 aa7.08□□□□□ -1.28
LSAMP-205ENST00000490035 COL8A2P25067 703 aa7.08□□□□□ -1.28
LSAMP-205ENST00000490035 Q5PR19 223 aa7.08□□□□□ -1.28
LSAMP-205ENST00000490035 IFITM1P13164 125 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 SYNJ2BPP57105 145 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 FHL1Q13642 323 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 VWC2Q2TAL6 325 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 MST1LQ2TV78 715 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 VOPP1Q96AW1 172 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 TMEM126AQ9H061 195 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 OVOL3O00110 214 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 LYPD2Q6UXB3 125 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 LTBP2Q14767 1821 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 CREBBPQ92793 2442 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 A0A0G2JRQ6 117 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 C9orf153Q5TBE3 101 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 LYPD6BQ8NI32 183 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 A0A0U1RRA0 63 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 C15orf65H3BRN8 121 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 GNLYP22749 145 aa7.07□□□□□ -1.28
LSAMP-205ENST00000490035 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 A0A1B0GUS0 222 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 IGHV7-4-1A0A0J9YVY3 117 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 TCTEX1D4Q5JR98 221 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 A0A087WWL8 130 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 ADCYAP1P18509 176 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 POLR3KQ9Y2Y1 108 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-205ENST00000490035 TSSC4Q9Y5U2 329 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-205ENST00000490035 A0A1W2PPM0 123 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 LTAP01374 205 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 IGKV1-6A0A0C4DH72 117 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 IGLC3P0DOY3 106 aa7.06□□□□□ -1.28
LSAMP-205ENST00000490035 K7EP34 96 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 FGF6P10767 208 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 DAZ2Q13117 558 aaKnown RBP7.05□□□□□ -1.28
LSAMP-205ENST00000490035 DAZ4Q86SG3 579 aaKnown RBP7.05□□□□□ -1.28
LSAMP-205ENST00000490035 FXYD5Q96DB9 178 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 ZMAT4Q9H898 229 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 DAZ3Q9NR90 486 aaKnown RBP7.05□□□□□ -1.28
LSAMP-205ENST00000490035 TFF1P04155 84 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 GTSF1LQ9H1H1 148 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 BRD3OSQ6XYD6 125 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 IGHV2-5P01817 119 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 LHFPL4Q7Z7J7 247 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 DMRTC2Q8IXT2 367 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-205ENST00000490035 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 TMEM258P61165 79 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 C1orf147Q96MC9 270 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-205ENST00000490035 SIGLEC8Q9NYZ4 499 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 LINC00527Q9UJ94 153 aa7.05□□□□□ -1.28
LSAMP-205ENST00000490035 IGLC1P0CG04 106 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 NPC2P61916 151 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 CRLF1O75462 422 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 TRACP01848 142 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 UBE2E2Q96LR5 201 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 MESP1Q9BRJ9 268 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 H0YGX0 51 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 DKK1O94907 266 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 F5H768 121 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 PCDH15Q96QU1 1955 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 SMKR1H3BMG3 65 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 K7EP13 123 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 SLX1AQ9BQ83 275 aa7.04□□□□□ -1.28
LSAMP-205ENST00000490035 J3QQQ9 107 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 SUMO4Q6EEV6 95 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 C11orf44Q8N8P7 122 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 ATG2AQ2TAZ0 1938 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 TMEM89A2RUT3 159 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 LOXP28300 417 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-205ENST00000490035 C8orf49Q96NF6 230 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 NPBQ8NG41 125 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 DEFB130BP0DP73 79 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 DEFB130AP0DP74 79 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 PRB3Q04118 309 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-205ENST00000490035 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 PLA2G2CQ5R387 149 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
LSAMP-205ENST00000490035 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 SLC25A29Q8N8R3 303 aa7.03□□□□□ -1.28
LSAMP-205ENST00000490035 PRR20EP86478 221 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 PRR20CP86479 221 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 PRR20DP86480 221 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 PRR20BP86481 221 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 PRR20AP86496 221 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 SP5Q6BEB4 398 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-205ENST00000490035 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 VPREB3Q9UKI3 123 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 IGHV3-53P01767 116 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 LINC00479Q96M42 142 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 Q6ZSR3 168 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 WFDC12Q8WWY7 111 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 C22orf46C9J442 243 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms