RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 AAED1Q7RTV5 226 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TEN1Q86WV5 123 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 ATOH7Q8N100 152 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HIST3H2BBQ8N257 126 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 SVBPQ8N300 66 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 LINC00471Q8N535 108 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 KCNRGQ8N5I3 272 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TTC9CQ8N5M4 171 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 LINC00311Q8N616 119 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 MORN4Q8NDC4 146 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 PLPP5Q8NEB5 264 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 OR4B1Q8NGF8 309 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 OR5D16Q8NGK9 328 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 WFDC5Q8TCV5 224 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 NAT14Q8WUY8 206 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 LCN9Q8WX39 176 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 COPS9Q8WXC6 57 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 DPH3Q96FX2 82 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF714Q96N38 554 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 YPEL2Q96QA6 119 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BLQ99880 126 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 SEC11CQ9BY50 192 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 NPCDR1Q9BY65 106 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 OSTCQ9NRP0 149 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 RPRMQ9NS64 109 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 EPDR1Q9UM22 224 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 NOP16Q9Y3C1 178 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 AP4S1Q9Y587 144 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 MPC1Q9Y5U8 109 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 SNURFQ9Y675 71 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HLA-DRB4X5D2U9 266 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 KIAA1107Q9UPP5 1409 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 PZPP20742 1482 aa0.53□□□□□ -2.33
CCDC39-206ENST00000489868 MYOM2P54296 1465 aa0.53□□□□□ -2.33
CCDC39-206ENST00000489868 TCOF1Q13428 1488 aaKnown RBP0.53□□□□□ -2.33
CCDC39-206ENST00000489868 BCL9LQ86UU0 1499 aa0.53□□□□□ -2.33
CCDC39-206ENST00000489868 ERICH3Q5RHP9 1530 aa0.53□□□□□ -2.33
CCDC39-206ENST00000489868 SYNJ1O43426 1573 aa0.53□□□□□ -2.33
CCDC39-206ENST00000489868 TTC37Q6PGP7 1564 aa0.53□□□□□ -2.33
CCDC39-206ENST00000489868 TRBV20-1A0A075B6N2 111 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TRAV12-2A0A075B6T6 113 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 C3orf85A0A1B0GTC6 90 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 A0A1W2PRS3 328 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TCRBV3S1A0A5B6 114 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 OOSP1A8MZH6 123 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 MCRIP1C9JLW8 97 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 C19orf84I3L1E1 186 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 APOC4-APOC2K7ER74 178 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 SDCBPO00560 298 aaPredicted RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 OR1I1O60431 355 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 EDF1O60869 148 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 IGHV3-7P01780 117 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TRACP01848 142 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 APOC2P02655 101 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PMP2P02689 132 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 C1QAP02745 245 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 RBP4P02753 201 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 MT-ATP8P03928 68 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TRAPPC2P0DI81 140 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TRAPPC2BP0DI82 140 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 IL7P13232 177 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TPT1P13693 172 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 FABP4P15090 132 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 RNASE4P34096 147 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PCBD1P61457 104 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 LSM3P62310 102 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 DYNLT1P63172 113 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 RPL18Q07020 188 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 KLRD1Q13241 179 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 CIRBPQ14011 172 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PEA15Q15121 130 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 KISS1Q15726 138 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 IQCJQ1A5X6 159 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 Q56UQ5 140 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 KHDC3LQ587J8 217 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 FAM74A1Q5RGS3 127 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 LINC01545Q5VT33 79 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 Q6AWC8 147 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 OR2T2Q6IF00 324 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 DPPA3Q6W0C5 159 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 SOSTDC1Q6X4U4 206 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 Q6ZUT4 128 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PHF5AQ7RTV0 110 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 ZNF720Q7Z2F6 126 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 C10orf111Q8N326 155 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 FAM216BQ8N7L0 139 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 SIGLECL1Q8N7X8 197 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 OTOSQ8NHW6 89 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PSMF1Q92530 271 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 DIRC1Q969H9 104 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 RAB37Q96AX2 223 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00526Q96FQ7 95 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00052Q96N35 136 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 MCEEQ96PE7 176 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 AQP10Q96PS8 301 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 SCGB3A1Q96QR1 104 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 VAMP8Q9BV40 100 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 DPY30Q9C005 99 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms