RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
CLIC4-202ENST00000488683 SFTPCP11686 197 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 KIR3DS1Q14943 382 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 ORMDL3Q8N138 153 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 FAM208BQ5VWN6 2430 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 TRAV8-2A0A0B4J237 113 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 BVES-AS1Q5T3Y7 98 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
CLIC4-202ENST00000488683 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
CLIC4-202ENST00000488683 VAMP3Q15836 100 aa9.73□□□□□ -0.85
CLIC4-202ENST00000488683 PRR9Q5T870 116 aa9.73□□□□□ -0.85
CLIC4-202ENST00000488683 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
CLIC4-202ENST00000488683 F6UB75 175 aa9.73□□□□□ -0.85
CLIC4-202ENST00000488683 NPFFO15130 113 aa9.73□□□□□ -0.85
CLIC4-202ENST00000488683 AKAP9Q99996 3911 aa9.73□□□□□ -0.85
CLIC4-202ENST00000488683 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 IGHV4-39P01824 125 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 PAX8Q06710 450 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 C2orf91Q6ZV80 131 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 ITLN2Q8WWU7 325 aaPredicted RBP9.72□□□□□ -0.85
CLIC4-202ENST00000488683 C20orf173Q96LM9 149 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 TAX1BP3O14907 124 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
CLIC4-202ENST00000488683 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 C5orf56Q8N8D9 126 aa9.72□□□□□ -0.85
CLIC4-202ENST00000488683 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 BMI1P35226 326 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 PCP4P48539 62 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 NMUP48645 174 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 KLK9Q2XQG4 91 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 C8orf86Q6ZUL3 223 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 ZNF738Q8NE65 137 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 KLK9Q9UKQ9 250 aa9.71□□□□□ -0.85
CLIC4-202ENST00000488683 IGHV4-61A0A0C4DH41 118 aa9.71□□□□□ -0.86
CLIC4-202ENST00000488683 K7EP13 123 aa9.71□□□□□ -0.86
CLIC4-202ENST00000488683 RPL11P62913 178 aaKnown RBP9.71□□□□□ -0.86
CLIC4-202ENST00000488683 KLK15Q9H2R5 256 aa9.71□□□□□ -0.86
CLIC4-202ENST00000488683 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.86
CLIC4-202ENST00000488683 TMEM95Q3KNT9 176 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 ACACBO00763 2458 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 FABP5P3A8MUU1 101 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 GOSR1O95249 250 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 LEPP41159 167 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 BLCAPP62952 87 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 AMMECR1LQ6DCA0 310 aa9.7□□□□□ -0.86
CLIC4-202ENST00000488683 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
CLIC4-202ENST00000488683 AGRNO00468 2067 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 FBLL1A6NHQ2 334 aaKnown RBP9.69□□□□□ -0.86
CLIC4-202ENST00000488683 MAPK1IP1LQ8NDC0 245 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 EEF1AKMT3Q96AZ1 226 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 TLN2Q9Y4G6 2542 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 H3BVH4 76 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 MS4A6AQ9H2W1 248 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 CBY1Q9Y3M2 126 aa9.69□□□□□ -0.86
CLIC4-202ENST00000488683 ANKRD17O75179 2603 aaKnown RBP9.68□□□□□ -0.86
CLIC4-202ENST00000488683 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 HBDP02042 147 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 CREBBPQ92793 2442 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 LRRK2Q5S007 2527 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 COX8AP10176 69 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 C10orf99Q6UWK7 81 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 PPP1R14DQ9NXH3 145 aa9.68□□□□□ -0.86
CLIC4-202ENST00000488683 TRAV41A0A0B4J266 112 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 FGF6P10767 208 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 SRSF2Q01130 221 aaKnown RBP9.67□□□□□ -0.86
CLIC4-202ENST00000488683 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 METTL26Q96S19 204 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 C7orf71A4D174 169 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 RBAKDNA6NC62 111 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 M0R381 172 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 RAB9AP51151 201 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 TMEM78Q5T7P6 136 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 TMEM158Q8WZ71 300 aa9.67□□□□□ -0.86
CLIC4-202ENST00000488683 NIPBLQ6KC79 2804 aaeCLIP9.67□□□□□ -0.86
CLIC4-202ENST00000488683 TRBV7-1A0A0A6YYK4 115 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 H3BUX3 64 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 ARL3P36405 182 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 C19orf54Q5BKX5 351 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 SPOCK3Q9BQ16 436 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms