RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ATP7BP35670 1465 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 TRAV17A0A0B4J275 112 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 IGHV1-24A0A0C4DH33 117 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 INS-IGF2F8WCM5 200 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 M0R129 80 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 LEPROTO15243 131 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 ZNF737O75373 536 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 NPYP01303 97 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-7P01780 117 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 CCL4P13236 92 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 ZNF823P16415 610 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 UBE2G1P62253 170 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 SP6Q3SY56 376 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 SLC48A1Q6P1K1 146 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 LSM10Q969L4 123 aaKnown RBP2.74□□□□□ -1.97
VPS8-224ENST00000488255 Q96M85 177 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 C20orf78Q9BR46 151 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 NXT2Q9NPJ8 142 aaKnown RBP2.74□□□□□ -1.97
VPS8-224ENST00000488255 MRPL35Q9NZE8 188 aaKnown RBP2.74□□□□□ -1.97
VPS8-224ENST00000488255 LINC00588Q9Y4M8 146 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 MAP3K4Q9Y6R4 1608 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 DENND4CQ5VZ89 1909 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.73□□□□□ -1.97
VPS8-224ENST00000488255 QRICH2Q9H0J4 1663 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 ECM29Q5VYK3 1845 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 COL1A1P02452 1464 aaPredicted RBP2.73□□□□□ -1.97
VPS8-224ENST00000488255 RALGAPBQ86X10 1494 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 RNF17Q9BXT8 1623 aaKnown RBP2.73□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 TRAV14DV4A0A0A6YYC5 116 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 TRAV3A0A0B4J244 114 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-66A0A0C4DH42 116 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 C11orf94C9JXX5 98 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 C3orf84H3BNL1 204 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 MSMBP08118 114 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 SLC25A16P16260 332 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 BSPH1Q075Z2 132 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 FOXF1Q12946 379 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 MRPL51Q4U2R6 128 aaKnown RBP2.73□□□□□ -1.97
VPS8-224ENST00000488255 LINC00643Q86TS7 51 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 ZNF645Q8N7E2 425 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 CLDND2Q8NHS1 167 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 CHCHD1Q96BP2 118 aaKnown RBP2.73□□□□□ -1.97
VPS8-224ENST00000488255 CST11Q9H112 138 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 TRAPPC1Q9Y5R8 145 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 F11RQ9Y624 299 aaKnown RBP2.73□□□□□ -1.97
VPS8-224ENST00000488255 A0A1B0GUL6 1792 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 DIP2AQ14689 1571 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 CEP170Q5SW79 1584 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 MYO5CQ9NQX4 1742 aa2.73□□□□□ -1.97
VPS8-224ENST00000488255 ZSWIM8A7E2V4 1837 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 IGLV4-60A0A075B6I1 120 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 A0A096LNJ9 63 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-43A0A0B4J1X8 118 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 MDFIC2A0A1B0GVS7 189 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 CRYM-AS1A6NIL9 109 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 C17orf51A8MQB3 221 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 E7EQL1 145 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 F2Z2F3 143 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 CCL16O15467 120 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-30-3P0DP02 117 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 PEBP1P30086 187 aaKnown RBP2.72□□□□□ -1.97
VPS8-224ENST00000488255 RNASE4P34096 147 aaKnown RBP2.72□□□□□ -1.97
VPS8-224ENST00000488255 MIAQ16674 131 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 NUP210LQ5VU65 1888 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 C6orf201Q7Z4U5 140 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 MARCH3Q86UD3 253 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 TMEM256Q8N2U0 113 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 WFDC5Q8TCV5 224 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 ITLN2Q8WWU7 325 aaPredicted RBP2.72□□□□□ -1.97
VPS8-224ENST00000488255 LINC01600Q96MT4 127 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 CYP4F30PQ9H0H9 118 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 ANKRD50Q9ULJ7 1429 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 SBF2Q86WG5 1849 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 CFAP43Q8NDM7 1665 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 HMGXB3Q12766 1538 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.72□□□□□ -1.97
VPS8-224ENST00000488255 TOPBP1Q92547 1522 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 LRP4O75096 1905 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 MYH8P13535 1937 aa2.72□□□□□ -1.97
VPS8-224ENST00000488255 LAMC1P11047 1609 aa2.71□□□□□ -1.97
VPS8-224ENST00000488255 ABCA6Q8N139 1617 aa2.71□□□□□ -1.97
VPS8-224ENST00000488255 PRXQ9BXM0 1461 aa2.71□□□□□ -1.97
VPS8-224ENST00000488255 MED1Q15648 1581 aaPredicted RBP2.71□□□□□ -1.98
VPS8-224ENST00000488255 IGLV11-55A0A075B6I3 123 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 FXYD6-FXYD2A0A087WZ82 144 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 IGKV1D-43A0A0B4J1Z2 117 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 IGKV1-9A0A0C4DH69 117 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 IGHV3-64DA0A0J9YX35 117 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 LRCOL1A6NCL2 159 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 K7ERJ3 54 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 IGLV2-8P01709 118 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 IGHV1-69P01742 117 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 TSPEAR-AS2P59090 65 aa2.71□□□□□ -1.98
VPS8-224ENST00000488255 FUT5Q11128 374 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms