RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GUCA1BQ9UMX6 200 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SLC22A13Q9Y226 551 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 GINS2Q9Y248 185 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PRELID3BQ9Y3B1 194 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LENEPQ9Y5L5 61 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IER3IP1Q9Y5U9 82 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LINC00312Q9Y6C7 94 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LY96Q9Y6Y9 160 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LINC01558Q9Y6Z2 57 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TMEM56-RWDD3S4R434 201 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SAMD9Q5K651 1589 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 FRMPD1Q5SYB0 1578 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 UGGT1Q9NYU2 1555 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DIP2BQ9P265 1576 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 INO80Q9ULG1 1556 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 KMT2CQ8NEZ4 4911 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LAMA5O15230 3695 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ABCC1P33527 1531 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LPAP08519 4548 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MUC17Q685J3 4493 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LAMB1P07942 1786 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RBBP6Q7Z6E9 1792 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PAPPA2Q9BXP8 1791 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LRP2P98164 4655 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PARP4Q9UKK3 1724 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CUL7Q14999 1698 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ASCC3Q8N3C0 2202 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 WDR97A6NE52 1622 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LRRC37A3O60309 1634 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KIF14Q15058 1648 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CAMSAP1Q5T5Y3 1602 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IQGAP3Q86VI3 1631 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ABCA6Q8N139 1617 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 USP32Q8NFA0 1604 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CCDC180Q9P1Z9 1646 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MGAMO43451 1857 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 THOC2Q8NI27 1593 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RB1CC1Q8TDY2 1594 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CFAP74Q9C0B2 1584 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 VPS13DQ5THJ4 4388 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRBV20-1A0A075B6N2 111 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 A0A087WWC5 75 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 A0A087X0T9 212 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DEFB131BA0A096LNP1 70 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRAV2A0A0B4J234 112 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRAV1-2A0A0B4J238 106 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRAV4A0A0B4J268 109 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 A0A0G2JMM0 328 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRBV30A0A0K0K1B3 111 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRBV27A0A0K0K1C4 114 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TRDV1A0A1B0GX56 115 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 A0A1W2PPB8 328 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 A0A1W2PRS3 328 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TCRBV4S1A1TA0A5B7 111 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IGLC7A0M8Q6 106 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMEM218A2RU14 115 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RBAKDNA6NC62 111 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PRORSD1PA6NEY8 169 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DPRXA6NFQ7 191 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 FAM24AA6NFZ4 105 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C9orf92A6NGG3 77 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IFITM5A6NNB3 132 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SNRPGP15A8MWD9 76 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KIR3DP1A8MWS1 328 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DEFB108AA8MXU0 73 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMEM114B3SHH9 223 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMEM262E9PQX1 116 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C17orf112F2Z3M2 114 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 F6UZH7 168 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 H3BQF6 201 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 H3BQV1 296 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 K7EMI3 77 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 K7EQZ3 153 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 M0QY20 66 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 M0QZ58 72 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 M0R2P5 195 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 M0R378 163 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PSMD12O00232 456 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GPR31O00270 319 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KPNA3O00505 521 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KPNA4O00629 521 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SULT1B1O43704 296 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CHP2O43745 196 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SPINK4O60575 86 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TIMM17BO60830 172 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 EDF1O60869 148 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GGCTO75223 188 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SMIM24O75264 130 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 BANF1O75531 89 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR2J2O76002 312 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR7C1O76099 320 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PROSCO94903 275 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NDUFA3O95167 84 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NDUFC2O95298 119 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DEXIO95424 95 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 AHSA1O95433 338 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SIX6O95475 246 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms